| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224847
Identifier: 226224847
GI number: 226224847
Start: 2336904
End: 2337968
Strand: Reverse
Name: 226224847
Synonym: Lm4b_02266
Alternate gene names: NA
Gene position: 2337968-2336904 (Counterclockwise)
Preceding gene: 226224848
Following gene: 226224841
Centisome position: 80.27
GC content: 32.58
Gene sequence:
>1065_bases ATGAGTGCAGGGCTTCTTTGGAAAGAATGGCGTCAGAATGCGTGGGTATTTATATTTATTTTAATCGCTTTTATAGGTTC TGAAGCTACGACTGCAACGAACGCGGTTAGTATGTTTAATGACAACTATAACTATTATCAGTCTGAAGAATTTCAAAAAA ATAATACAGCAGATCAACAAATGACGGGTAATGAAATAAAAAATGATTTAAGTTTAACTCCTTATGATTTTGAAGGGAAT TTAGGGCTTTTCTTCTATGTGTTTCTGTTTTTAGGGTTAAAGTTAACTGTTTTTGAGAAAAATAAGCAAATGGATTATTT TACTTTTGGATTGCCATACTCCAAGAAGCAAATTTTTTGGCATAAGATGCTTATTCCATTACTTTTAATTTTCGTACTAG TACCAATCATCATTTTCTGTAGGTTTTGGTATATTTACCAGCAAATACCGGGGTTGTATTTACCCAGTGTGAGCGATTCT TTGATGTATATTAGTTCCTTTTTGTTATTGTATTTATTTTCTTACACGTTAGCAGTGGCAGTCGGGAATTTGGTTGGAGA GATAATTACAGCCGGAATTATAGCGATTGGATCTATTGTTAGCTTTTTATACATGTTTCCAGGCGCATTGACTAATTTAA TCATTGGTTTTAAAGCTTTCTTTACTGGAAAAACAATAGTGGATATTGATGGTGGAGCAGTTATGCTGTATAACGCAATA CCTACGCCAATTTTACAAGGAACTACAGCGTTAAGTGAATTTGTCATATTAATTATCTTATCAATAGGAATGTTAACCAT TAGCTGGTATGCGATGAAAACAGCTTCTTTGGAAAACGATGGTAGATTTTTAATGAATAATAAATTCCGGGTCCCTATAC TTATCATTGGTTCTCTTTATGTGACTATTTGTTTAAGTGGCCATTATGCAAGTTTTAATTACGATCAATTAATTCCGACG GGACAAGTTATAAGTTTAATAATTAAAATTATACTGATTTTAGTTGCATCTGTTATTGCTTTTTGGATGCTCATGTACAA ATGGAAGACGTTACGGAAACATTAA
Upstream 100 bases:
>100_bases CAGCAATAAAAAAAGAAAAACCAATTTTCATGGATGAACTCGCAGTCACATTAGAAGACTTGTTTATTTATCATCTAGAA GAACTAGGAGGCGAGAAATC
Downstream 100 bases:
>100_bases AAAAGACCGAGAATTGAGGAATCAATTCTCGGTCTTTTTTAAATATGATCTCGAGCAAATTTTTTCTTTCTTGTAAATAC AATCATTAAGAGAGCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSAGLLWKEWRQNAWVFIFILIAFIGSEATTATNAVSMFNDNYNYYQSEEFQKNNTADQQMTGNEIKNDLSLTPYDFEGN LGLFFYVFLFLGLKLTVFEKNKQMDYFTFGLPYSKKQIFWHKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDS LMYISSFLLLYLFSYTLAVAVGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFKAFFTGKTIVDIDGGAVMLYNAI PTPILQGTTALSEFVILIILSIGMLTISWYAMKTASLENDGRFLMNNKFRVPILIIGSLYVTICLSGHYASFNYDQLIPT GQVISLIIKIILILVASVIAFWMLMYKWKTLRKH
Sequences:
>Translated_354_residues MSAGLLWKEWRQNAWVFIFILIAFIGSEATTATNAVSMFNDNYNYYQSEEFQKNNTADQQMTGNEIKNDLSLTPYDFEGN LGLFFYVFLFLGLKLTVFEKNKQMDYFTFGLPYSKKQIFWHKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDS LMYISSFLLLYLFSYTLAVAVGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFKAFFTGKTIVDIDGGAVMLYNAI PTPILQGTTALSEFVILIILSIGMLTISWYAMKTASLENDGRFLMNNKFRVPILIIGSLYVTICLSGHYASFNYDQLIPT GQVISLIIKIILILVASVIAFWMLMYKWKTLRKH >Mature_353_residues SAGLLWKEWRQNAWVFIFILIAFIGSEATTATNAVSMFNDNYNYYQSEEFQKNNTADQQMTGNEIKNDLSLTPYDFEGNL GLFFYVFLFLGLKLTVFEKNKQMDYFTFGLPYSKKQIFWHKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDSL MYISSFLLLYLFSYTLAVAVGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFKAFFTGKTIVDIDGGAVMLYNAIP TPILQGTTALSEFVILIILSIGMLTISWYAMKTASLENDGRFLMNNKFRVPILIIGSLYVTICLSGHYASFNYDQLIPTG QVISLIIKIILILVASVIAFWMLMYKWKTLRKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40310; Mature: 40179
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGLLWKEWRQNAWVFIFILIAFIGSEATTATNAVSMFNDNYNYYQSEEFQKNNTADQQ CCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHH MTGNEIKNDLSLTPYDFEGNLGLFFYVFLFLGLKLTVFEKNKQMDYFTFGLPYSKKQIFW HCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCHHHHHH HKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDSLMYISSFLLLYLFSYTLAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFKAFFTGKTIVDIDGGAVMLYNAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECC PTPILQGTTALSEFVILIILSIGMLTISWYAMKTASLENDGRFLMNNKFRVPILIIGSLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHEEHHHHH VTICLSGHYASFNYDQLIPTGQVISLIIKIILILVASVIAFWMLMYKWKTLRKH HHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAGLLWKEWRQNAWVFIFILIAFIGSEATTATNAVSMFNDNYNYYQSEEFQKNNTADQQ CCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHH MTGNEIKNDLSLTPYDFEGNLGLFFYVFLFLGLKLTVFEKNKQMDYFTFGLPYSKKQIFW HCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCHHHHHH HKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDSLMYISSFLLLYLFSYTLAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFKAFFTGKTIVDIDGGAVMLYNAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECC PTPILQGTTALSEFVILIILSIGMLTISWYAMKTASLENDGRFLMNNKFRVPILIIGSLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHEEHHHHH VTICLSGHYASFNYDQLIPTGQVISLIIKIILILVASVIAFWMLMYKWKTLRKH HHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA