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The map label for this gene is 226224842

Identifier: 226224842

GI number: 226224842

Start: 2330498

End: 2331352

Strand: Direct

Name: 226224842

Synonym: Lm4b_02261

Alternate gene names: NA

Gene position: 2330498-2331352 (Clockwise)

Preceding gene: 226224840

Following gene: 226224843

Centisome position: 80.01

GC content: 43.16

Gene sequence:

>855_bases
ATGACAAATGCAAATGGCAACCTAAAAAAATGCCCCATCACGATTAGCTCTTATACGCTTGGAACAGAGGTATCTTTTCC
TAAACGAGTAAAAGTCGCTGCGGAAAACGGTTTTGACGGAATTGGCTTGCGTGCAGAAAACTATGTAGATGCACTAGCTG
CCGGATTAACGGATGAAGACATGTTGCGGATTTTAGACGAGCATAACATGAAAGTAACAGAAGTGGAGTACATAACTCAG
TGGGGAACTGCCGAAGATCGTACAGCAGAACAACAAAAGAAAGAGCAAACAACTTTCCACATGGCGCGATTATTTGGCGT
CAAACATATTAATTGTGGTTTGCTTGAAAAAATCCCTGAGGAACAAATCATCGTCGCGCTTGGTGAATTATGTGACCGCG
CAGAAGAATTAATTATTGGTTTAGAATTTATGCCATATAGCGGTGTAGCAGACTTACAAGCAGCTTGGCGAGTAGCAGAA
GCATGCGGCCGAGATAATGCGCAACTTATTTGTGACACGTGGCACTGGGCTAGAGCAAACCAAACAGCAGAATCTATCAA
AAACGTTCCCGCTGATCGGATTGTTTCCATCCAACTATGCGATGTCCACGAAACGCCTTACAAAGAACTTCGTGAGGAAT
CACTTCATGATCGTCTAGCTCCTGGAGAAGGCTACGGAGATACGGTCGGTTTTGCAAAAATTTTAAAAGAACATGGTGTA
AATCCACGTGTGATGGGAGTCGAAGTTATTTCAGACTCTATGGTAGCAACTGGTTTAGAGTATGCCGCCCTTAAAGTATA
CAATGCCACGAAAAAAGTATTAGACGAAGCATGGCCAGAAATTTCTCCACGCTAA

Upstream 100 bases:

>100_bases
CAGAGGTTTTTAATTAAGCGGAATTAATTTTTTTACTGGTGTTTGTGAAAATATTATCAAAGTTTCTTGTAATTTTTATT
ATGGAGAGGAGATAATTTTT

Downstream 100 bases:

>100_bases
ACACCTACTCGCTTATGTGAAAATAATAACGTAGTAGGAAGACTCCCTGTGAAAGGAATGTGTTATTTTTGAAATTTAAT
TCGATGTTTTCACCTATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Sugar Phosphate Isomerase/Epimerase; 4-Hydroxyphenylpyruvate Dioxygenase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein; Xylose Isomerase-Like TIM Barrel; AP Endonuclease Family; IolI Protein

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQ
WGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAE
ACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGV
NPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR

Sequences:

>Translated_284_residues
MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQ
WGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAE
ACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGV
NPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR
>Mature_283_residues
TNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQW
GTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAEA
CGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVN
PRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31578; Mature: 31447

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDED
CCCCCCCCEECCEEEECEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHH
MLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPE
HHHHHHHCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCH
EQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTWHWARAN
HHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
QTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGV
HHHHHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
NPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR
CCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDED
CCCCCCCEECCEEEECEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHH
MLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPE
HHHHHHHCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCH
EQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTWHWARAN
HHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
QTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGV
HHHHHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
NPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR
CCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA