| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yxlG [H]
Identifier: 226224834
GI number: 226224834
Start: 2321890
End: 2322684
Strand: Reverse
Name: yxlG [H]
Synonym: Lm4b_02253
Alternate gene names: 226224834
Gene position: 2322684-2321890 (Counterclockwise)
Preceding gene: 226224835
Following gene: 226224833
Centisome position: 79.74
GC content: 37.86
Gene sequence:
>795_bases ATGACACATTTTAATGCTTTATTAGCAAGAGAATGGCTGGAACAACGTCGAAGTTTAAAAATTATTTGGCTTCCGATTGT ATTCGCACTTCTTGGCCTCACTCAACCACTAATGATGTATTTTTTACCAGAAATTCTAAAAGCAGTTGGCACGGGAGCGG AAACGGAGCAAGTAATTGCATTAATGGGGGATCAATCGGCTCAGGAAGTGATGGCACAAACACTCGGTTCCCAGTTTGAT CAAATTGGCATTATCATTATCATCGTTGTTGCGATGGCTTGCATTCAAAATGACCGAACTAGAGGCATGTTAGCGTTTAT CATGACAAGACCAGTGAGCGCTGCGGAATATGTTTTATCGAAATGGGTAATGCAATGTATGGTGGGGTTAAGTTCACTTT TAATTGGCTATGTGTTGGCGGCTTATTATACGTACTTTTTATTTGGAGAACTAGCGATCAATTCTTTAACGCAGGCATTT TTTGTGTACGCCATCTGGTTTATTTTCGTAATTAGCTTGGTTGTTTTTGCGAGCGCGGTTTTTGATAGTAATGCCGTTGT TGCGATGATTAGCGTGTTTATAGCAATTGTTTTAGGGGTAATCAGTGGTTTTGGCGGCTGGATTCAAATGTTTAATCCAG CATATCTAAGTAAAAATGCAACAATGCTAATTATGTCTGATAAGACGATGGATTATTTTATTCCAACACTTTGTATTACT ATCTTATGGATTTTCGCATTTATAAGTCTAACTATCCTAATGATAAAAATAAAACCACTCCCAAAAACGGAATAG
Upstream 100 bases:
>100_bases AAGCTATTTTGAAATCTTTATTACAAATAGAAGGTGAATTTATTCGTGTCGAAAACAGACACCAAAGCTTAGAGGAAATC TTTATGGAGAAGGTGGGCAA
Downstream 100 bases:
>100_bases CGAACATTTTTCATGTGTTTTGCGAAAACATCCGCTTTATACTAAAATAGAATAAAAAGGGGTGGCGACATGGAACGAAT AGAGCGAGATACGCTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTHFNALLAREWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPEILKAVGTGAETEQVIALMGDQSAQEVMAQTLGSQFD QIGIIIIIVVAMACIQNDRTRGMLAFIMTRPVSAAEYVLSKWVMQCMVGLSSLLIGYVLAAYYTYFLFGELAINSLTQAF FVYAIWFIFVISLVVFASAVFDSNAVVAMISVFIAIVLGVISGFGGWIQMFNPAYLSKNATMLIMSDKTMDYFIPTLCIT ILWIFAFISLTILMIKIKPLPKTE
Sequences:
>Translated_264_residues MTHFNALLAREWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPEILKAVGTGAETEQVIALMGDQSAQEVMAQTLGSQFD QIGIIIIIVVAMACIQNDRTRGMLAFIMTRPVSAAEYVLSKWVMQCMVGLSSLLIGYVLAAYYTYFLFGELAINSLTQAF FVYAIWFIFVISLVVFASAVFDSNAVVAMISVFIAIVLGVISGFGGWIQMFNPAYLSKNATMLIMSDKTMDYFIPTLCIT ILWIFAFISLTILMIKIKPLPKTE >Mature_263_residues THFNALLAREWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPEILKAVGTGAETEQVIALMGDQSAQEVMAQTLGSQFDQ IGIIIIIVVAMACIQNDRTRGMLAFIMTRPVSAAEYVLSKWVMQCMVGLSSLLIGYVLAAYYTYFLFGELAINSLTQAFF VYAIWFIFVISLVVFASAVFDSNAVVAMISVFIAIVLGVISGFGGWIQMFNPAYLSKNATMLIMSDKTMDYFIPTLCITI LWIFAFISLTILMIKIKPLPKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29528; Mature: 29397
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHFNALLAREWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPEILKAVGTGAETEQVIA CCHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LMGDQSAQEVMAQTLGSQFDQIGIIIIIVVAMACIQNDRTRGMLAFIMTRPVSAAEYVLS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH KWVMQCMVGLSSLLIGYVLAAYYTYFLFGELAINSLTQAFFVYAIWFIFVISLVVFASAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDSNAVVAMISVFIAIVLGVISGFGGWIQMFNPAYLSKNATMLIMSDKTMDYFIPTLCIT HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHH ILWIFAFISLTILMIKIKPLPKTE HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure THFNALLAREWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPEILKAVGTGAETEQVIA CHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LMGDQSAQEVMAQTLGSQFDQIGIIIIIVVAMACIQNDRTRGMLAFIMTRPVSAAEYVLS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH KWVMQCMVGLSSLLIGYVLAAYYTYFLFGELAINSLTQAFFVYAIWFIFVISLVVFASAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDSNAVVAMISVFIAIVLGVISGFGGWIQMFNPAYLSKNATMLIMSDKTMDYFIPTLCIT HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHH ILWIFAFISLTILMIKIKPLPKTE HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]