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The map label for this gene is 226224831

Identifier: 226224831

GI number: 226224831

Start: 2318781

End: 2319134

Strand: Reverse

Name: 226224831

Synonym: Lm4b_02250

Alternate gene names: NA

Gene position: 2319134-2318781 (Counterclockwise)

Preceding gene: 226224832

Following gene: 226224830

Centisome position: 79.62

GC content: 34.18

Gene sequence:

>354_bases
ATGGCAGTTAATATTTATGATTTAGCACATGATTTAGACAAAGGAATTCGTGAAACACCTGAATTCATCAGCTTACAAGA
TGCATACCGTGAAGTAAACGAAAATGCAGATGCAAAAGCAAAATTCGAACGTTTTCGCGATGTTCAAGTAACTATCCAAG
AAAAACAAATGACTGGTCAAGAAATTGACGACGAAACAGTAGATGTAGCACAACAAGTAGCGCAAGAAGTTCAAGAAAAC
GAACTAATCGTTAAATTAATGGAAAAAGAGCAAGCGATGAGTACAATTATCAATGATCTAAATCGCATTATCATGACGCC
ATTACAAGATCTTTATAATGTAGCTAATGATTAA

Upstream 100 bases:

>100_bases
TCTCGCAATGTGGATTTAGTTCTTTTATACTGGAATAACCGGCGACTTTTTGTTATAGTGAAACAGAAGTGACAAATACA
GATATTTGGAGGATTTATCA

Downstream 100 bases:

>100_bases
TTTTCATTAAACCAAGTGGCTCTATTATTTGTTATTTATTTAGCAGATAATAGGGTCATTTTTTTATTGGAAATGCTTGT
ACCTAACGTAATAGTAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQEIDDETVDVAQQVAQEVQEN
ELIVKLMEKEQAMSTIINDLNRIIMTPLQDLYNVAND

Sequences:

>Translated_117_residues
MAVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQEIDDETVDVAQQVAQEVQEN
ELIVKLMEKEQAMSTIINDLNRIIMTPLQDLYNVAND
>Mature_116_residues
AVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQEIDDETVDVAQQVAQEVQENE
LIVKLMEKEQAMSTIINDLNRIIMTPLQDLYNVAND

Specific function: Unknown

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0342 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2223_LISMO (Q8Y553)

Other databases:

- EMBL:   AL591982
- PIR:   AG1352
- RefSeq:   NP_465747.1
- ProteinModelPortal:   Q8Y553
- SMR:   Q8Y553
- GeneID:   987403
- GenomeReviews:   AL591824_GR
- KEGG:   lmo:lmo2223
- GenoList:   LMO2223
- HOGENOM:   HBG499075
- OMA:   EYKAIKD
- ProtClustDB:   PRK13676
- BioCyc:   LMON169963:LMO2223-MONOMER
- HAMAP:   MF_01526
- InterPro:   IPR010368

Pfam domain/function: PF06133 DUF964

EC number: NA

Molecular weight: Translated: 13502; Mature: 13371

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQ
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EIDDETVDVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNRIIMTPLQDLYNVAND
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQ
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EIDDETVDVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNRIIMTPLQDLYNVAND
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669