Click here to switch to the map view.

The map label for this gene is ytmB [H]

Identifier: 226224271

GI number: 226224271

Start: 1709756

End: 1709998

Strand: Reverse

Name: ytmB [H]

Synonym: Lm4b_01681

Alternate gene names: 226224271

Gene position: 1709998-1709756 (Counterclockwise)

Preceding gene: 226224272

Following gene: 226224270

Centisome position: 58.71

GC content: 32.1

Gene sequence:

>243_bases
TTGGGTATGCCACTAGAGGTAAACACAATGATTGTAACAAAAGGAAAAGAAAAGCGAATTTCTGATAATTTCTTTGAACT
AGAAAAATTAGGTTATCGGATTTATCCAATTGATGTGCCAATCGCAGTACGTAAAACAAAAGAAGGCGAAACACTTGGAG
AAGCAATCCCTCGAAAACTCGTGTGGGAAAATAATAAAACTATCATTAAATATGAATTAATCGCATTAAATTCAAGTAAT
TAA

Upstream 100 bases:

>100_bases
TGGTCCAAATTGTGCAACAAGCTGAGCGAATCTTAAATGATAAAAACTAGTCAAATAGGGGCAATCTCTGCTATGATTAA
AGAAACTGGAGGTGGGAAAA

Downstream 100 bases:

>100_bases
TTGTGGAGGGGATTTTTTGAAACGGAAGGTTGGAATAATTGGTACTGGTCATGTTGGGAGCGACGTGGCTTTTTCCCTCG
TAACTCAAGGGATTTGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MGMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVRKTKEGETLGEAIPRKLVWENNKTIIKYELIALNSSN

Sequences:

>Translated_80_residues
MGMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVRKTKEGETLGEAIPRKLVWENNKTIIKYELIALNSSN
>Mature_79_residues
GMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVRKTKEGETLGEAIPRKLVWENNKTIIKYELIALNSSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019699 [H]

Pfam domain/function: PF10763 DUF2584 [H]

EC number: NA

Molecular weight: Translated: 9197; Mature: 9066

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVRKTKEGETLGEAIPRKL
CCCCEECEEEEEECCCCCCCCCCCEEHHHCCCEEEEECCCEEEEECCCCCCHHHHCCCCE
VWENNKTIIKYELIALNSSN
EECCCCEEEEEEEEEEECCC
>Mature Secondary Structure 
GMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVRKTKEGETLGEAIPRKL
CCCEECEEEEEECCCCCCCCCCCEEHHHCCCEEEEECCCEEEEECCCCCCHHHHCCCCE
VWENNKTIIKYELIALNSSN
EECCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]