Click here to switch to the map view.

The map label for this gene is 226224259

Identifier: 226224259

GI number: 226224259

Start: 1691374

End: 1691658

Strand: Reverse

Name: 226224259

Synonym: Lm4b_01669

Alternate gene names: NA

Gene position: 1691658-1691374 (Counterclockwise)

Preceding gene: 226224260

Following gene: 226224258

Centisome position: 58.08

GC content: 24.91

Gene sequence:

>285_bases
GTGTCAACGACGAAAAACAATATAGATTACATTAAAACAGTACAAAACATAAAAAGTTTTTTTGATGAATTTCAATATTT
GGTTTTTCTGCTAGGTTCTAAAAATAAAATAAAGCTCAATACAGACGGATTAATAGAAATAAAAGTGTTAACAGGCAATA
AAATAAGTTTGACTCCTATAGGTCACTTAGTTCAATTTTACTTGGGAATATTAAATGACATGAAAGCACTACATCGCTTT
ATTTTAATTAAATGTTATATTGAGATAAACAAAAAGATATTTTAA

Upstream 100 bases:

>100_bases
AGAAGCTTCGAAATTAGTTTTATTACTAATTTCGAAGCTTTTTTACGCAGTTAGCATAACAAATAATGAATCCGTTTTGA
TAGTATTAAAGTAAAACGGG

Downstream 100 bases:

>100_bases
CAATGTTGGAAATGCCTTATGAAATTGCGCAATTTAAAAGAATAAAAAAACATGGTGTTCTTAGTTTAGCCGAAAAGCTT
GAAATGATTGTTGAAAAAAA

Product: Antigen C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSTTKNNIDYIKTVQNIKSFFDEFQYLVFLLGSKNKIKLNTDGLIEIKVLTGNKISLTPIGHLVQFYLGILNDMKALHRF
ILIKCYIEINKKIF

Sequences:

>Translated_94_residues
MSTTKNNIDYIKTVQNIKSFFDEFQYLVFLLGSKNKIKLNTDGLIEIKVLTGNKISLTPIGHLVQFYLGILNDMKALHRF
ILIKCYIEINKKIF
>Mature_93_residues
STTKNNIDYIKTVQNIKSFFDEFQYLVFLLGSKNKIKLNTDGLIEIKVLTGNKISLTPIGHLVQFYLGILNDMKALHRFI
LIKCYIEINKKIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10927; Mature: 10796

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTKNNIDYIKTVQNIKSFFDEFQYLVFLLGSKNKIKLNTDGLIEIKVLTGNKISLTPI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCEEEECHH
GHLVQFYLGILNDMKALHRFILIKCYIEINKKIF
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
STTKNNIDYIKTVQNIKSFFDEFQYLVFLLGSKNKIKLNTDGLIEIKVLTGNKISLTPI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCEEEECHH
GHLVQFYLGILNDMKALHRFILIKCYIEINKKIF
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA