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The map label for this gene is ytmP [H]

Identifier: 226224217

GI number: 226224217

Start: 1642177

End: 1642959

Strand: Reverse

Name: ytmP [H]

Synonym: Lm4b_01627

Alternate gene names: 226224217

Gene position: 1642959-1642177 (Counterclockwise)

Preceding gene: 226224218

Following gene: 226224216

Centisome position: 56.41

GC content: 38.19

Gene sequence:

>783_bases
ATGAAAGATAACTTTTTTGGGAGAGAATATGACATAGCTCCGGCCGGAGGGGAAACTGGCCAGGCATTCGTTGCAACACA
TGAAGACGAAAAATTCTTTTTAAAAAGAAATTCTTCGCCTTTTTTAGCTGCGCTTTCTGTAGAAAACATCGTTCCAAAAT
TAGTTTGGACGAGACGCGTAGAGAATGGAGATGTCATCACTGCTCAAAAATGGGTGAATTGCCATATTTTGACACGTGAA
GAAATGGTTGGACCGCGAGTGGCAAAACTATTAGCTAAAATCCACCATTCAGAAAACTTGCAACACATGCTAGCGAAAAT
CGAAAACTGCTATTTTTCTGCAGATCAACTTTTGAGTCTCATAAAAGTAAACACAAAAGCTAATAACGAGCTATCGAAAG
AAATAATAGCAGCAATCCGCTATTTAGAACAGAATCTCTCTGCTGCTCAGACGAACGATTATGTAGTTTGTCACGGAGAT
GTTAACCATAATAATTGGATTATTTCTGAAGAAAACGAACTGTTTCTAGTTGATTGGGATGGTGCGATGCTTGCAGACCC
TGCGAATGATATCGGAATGATTTTATACCAATATATTCCGCGAAAAGATTGGGTAAGTTGGCTCTCTAATTACGGCACCA
CATTAACCGAAGAATTACATCGCAAATTAAAATGGTATACAATTTGTCAAACGGTTATGCAACTCATAACCGAGCATTCG
AATGAAGCCAATGAACGAGCAAAACAAATTTTTCAAAATGCAATAGAAGATGATGAGGTGTAA

Upstream 100 bases:

>100_bases
CTAAGAGAAGTAAAATCATGAATAGTTACCTATTTGTTCGGAAGTGAAATAAACGAGGGATAGTGAAGTTGCAAAGAGCT
AATAAAAGGTGTGCATGTAG

Downstream 100 bases:

>100_bases
AGAAAGATGCGTGTAAAACATAAACCATGGGCAAAAGATAGATTGGAAGAATTCCCAGCAATTTACATCAAAAACCCAGA
AGATTTCAAAGGTCAGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAALSVENIVPKLVWTRRVENGDVITAQKWVNCHILTRE
EMVGPRVAKLLAKIHHSENLQHMLAKIENCYFSADQLLSLIKVNTKANNELSKEIIAAIRYLEQNLSAAQTNDYVVCHGD
VNHNNWIISEENELFLVDWDGAMLADPANDIGMILYQYIPRKDWVSWLSNYGTTLTEELHRKLKWYTICQTVMQLITEHS
NEANERAKQIFQNAIEDDEV

Sequences:

>Translated_260_residues
MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAALSVENIVPKLVWTRRVENGDVITAQKWVNCHILTRE
EMVGPRVAKLLAKIHHSENLQHMLAKIENCYFSADQLLSLIKVNTKANNELSKEIIAAIRYLEQNLSAAQTNDYVVCHGD
VNHNNWIISEENELFLVDWDGAMLADPANDIGMILYQYIPRKDWVSWLSNYGTTLTEELHRKLKWYTICQTVMQLITEHS
NEANERAKQIFQNAIEDDEV
>Mature_260_residues
MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAALSVENIVPKLVWTRRVENGDVITAQKWVNCHILTRE
EMVGPRVAKLLAKIHHSENLQHMLAKIENCYFSADQLLSLIKVNTKANNELSKEIIAAIRYLEQNLSAAQTNDYVVCHGD
VNHNNWIISEENELFLVDWDGAMLADPANDIGMILYQYIPRKDWVSWLSNYGTTLTEELHRKLKWYTICQTVMQLITEHS
NEANERAKQIFQNAIEDDEV

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 29884; Mature: 29884

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAALSVENIVPKLVWTRRV
CCCCCCCCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCC
ENGDVITAQKWVNCHILTREEMVGPRVAKLLAKIHHSENLQHMLAKIENCYFSADQLLSL
CCCCEEEEEEEEEEEEEEHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
IKVNTKANNELSKEIIAAIRYLEQNLSAAQTNDYVVCHGDVNHNNWIISEENELFLVDWD
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEECC
GAMLADPANDIGMILYQYIPRKDWVSWLSNYGTTLTEELHRKLKWYTICQTVMQLITEHS
CCEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEANERAKQIFQNAIEDDEV
CHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAALSVENIVPKLVWTRRV
CCCCCCCCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCC
ENGDVITAQKWVNCHILTREEMVGPRVAKLLAKIHHSENLQHMLAKIENCYFSADQLLSL
CCCCEEEEEEEEEEEEEEHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
IKVNTKANNELSKEIIAAIRYLEQNLSAAQTNDYVVCHGDVNHNNWIISEENELFLVDWD
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEECC
GAMLADPANDIGMILYQYIPRKDWVSWLSNYGTTLTEELHRKLKWYTICQTVMQLITEHS
CCEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEANERAKQIFQNAIEDDEV
CHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]