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The map label for this gene is ytsP [H]

Identifier: 226224196

GI number: 226224196

Start: 1622115

End: 1622603

Strand: Direct

Name: ytsP [H]

Synonym: Lm4b_01606

Alternate gene names: 226224196

Gene position: 1622115-1622603 (Clockwise)

Preceding gene: 226224187

Following gene: 226224197

Centisome position: 55.69

GC content: 35.79

Gene sequence:

>489_bases
ATGATTGAAATCAAAAAAATGACCGGAACAAAAGAAGAAAATTATGCACTTGCTTTAAAACAAGTACAAGCAATGATTGC
TGGCGAACCAAATCTAATTGCGAATCTAAGTAATGTTTCTTCTATATTAAATCAAGCACTTTCTGATATTAATTGGGTTG
GATTTTATTTACTTGAAAAAGAAACAAATCAATTAGTACTCGGCCCCTTCCAAGGTTTGCCTGCTTGCATTCGCATTCCA
CTAGGTAAAGGTGTGTGCGGTTCTGCTGCCTCAGATCAAAAAACGTATATAATCGAAAATGTGCATGATTTCCCTGGACA
TATCGCCTGTGATGCAGCTTCTAATTCAGAAATCGTTCTACCAATTGTAAAAAATAATCAACTGCTTGGCGTGCTTGATA
TTGATAGTCCCCTTTTTAATCGTTTTGATGAAGTGGACCAGTTATGGCTAGAAAAAATCCGTGATGCGATTACTCAAGAA
ATAAATTGA

Upstream 100 bases:

>100_bases
GCAAGTAAAATCTATTCTATTACAAAACAAATTTCCCGAAATCCCTTGTCGTTCATGCTATACTAAAGACATTATTTGAA
AAGAAATGTGGGGATAAAAA

Downstream 100 bases:

>100_bases
CAAGCTACTAGTAACTATACTATACTGGAAGATGTGTAAAATGCAGCTTGAGTAAAATGAATGAGTGTGTTGTTTACCCC
CAGATGTAATTCTGTGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MIEIKKMTGTKEENYALALKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIP
LGKGVCGSAASDQKTYIIENVHDFPGHIACDAASNSEIVLPIVKNNQLLGVLDIDSPLFNRFDEVDQLWLEKIRDAITQE
IN

Sequences:

>Translated_162_residues
MIEIKKMTGTKEENYALALKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIP
LGKGVCGSAASDQKTYIIENVHDFPGHIACDAASNSEIVLPIVKNNQLLGVLDIDSPLFNRFDEVDQLWLEKIRDAITQE
IN
>Mature_162_residues
MIEIKKMTGTKEENYALALKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIP
LGKGVCGSAASDQKTYIIENVHDFPGHIACDAASNSEIVLPIVKNNQLLGVLDIDSPLFNRFDEVDQLWLEKIRDAITQE
IN

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=143, Percent_Identity=55.9440559440559, Blast_Score=168, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6322781, Length=155, Percent_Identity=46.4516129032258, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17837; Mature: 17837

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIKKMTGTKEENYALALKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEK
CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEC
ETNQLVLGPFQGLPACIRIPLGKGVCGSAASDQKTYIIENVHDFPGHIACDAASNSEIVL
CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEE
PIVKNNQLLGVLDIDSPLFNRFDEVDQLWLEKIRDAITQEIN
EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEIKKMTGTKEENYALALKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEK
CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEC
ETNQLVLGPFQGLPACIRIPLGKGVCGSAASDQKTYIIENVHDFPGHIACDAASNSEIVL
CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEE
PIVKNNQLLGVLDIDSPLFNRFDEVDQLWLEKIRDAITQEIN
EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]