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The map label for this gene is yqfN [H]

Identifier: 226224054

GI number: 226224054

Start: 1469403

End: 1470107

Strand: Reverse

Name: yqfN [H]

Synonym: Lm4b_01463

Alternate gene names: 226224054

Gene position: 1470107-1469403 (Counterclockwise)

Preceding gene: 226224055

Following gene: 226224053

Centisome position: 50.47

GC content: 37.59

Gene sequence:

>705_bases
ATGAACGAAGAGCAATTATCGAAGCGACTCGAAAAAGTGGCTTCTTACATAACAAAAAATGAACGAATCGCAGACATCGG
AAGCGATCATGCTTATTTACCTTGTTTTGCAGTTAAAAATCAAACGGCTTCGTTCGCTATTGCTGGCGAAGTAGTTGATG
GACCTTTTCAATCTGCACAAAAACAAGTTCGTTCTTCTGGCTTAACAGAACAAATTGACGTTAGAAAAGGGAACGGTTTA
GCTGTTATCGAAAAAAAGGATGCGATTGATACAATTGTGATTGCAGGCATGGGTGGCACGTTGATACGTACTATTTTAGA
GGAAGGTGCAGCAAAATTAGCCGGTGTAACCAAACTAATTTTACAACCTAATATTGCAGCCTGGCAATTAAGAGAGTGGT
CCGAACAAAACAATTGGCTTATTACTTCTGAAGCAATTTTACGCGAAGATAATAAAGTTTATGAAATCATGGTGTTAGCT
CCGTCTGAAAAACCAGTTACTTGGACTAAGCAAGAAATATTTTTCGGACCATGCTTATTAAAAGAACAAAGCGCCATTTT
CAAAAGCAAGTGGCGCCATGAAGCAAATACATGGCAAAATATTATTCAGACTATTTCTAACAACCAACCAGTTTCAACAG
AAAACCAAGCGAAAATTCGTGAATTAGAACATAAAATCGCATTAGTAGAGGATGTGCTAAAATGA

Upstream 100 bases:

>100_bases
CGCAGCAAACAACTAAAAGACTTCCTGGAATAAAGCACAACCGGGCAGGAGGACAAACCGTTCTCCTGCCTTTTTAATGA
AAATGAAAGTAGGGAACCAA

Downstream 100 bases:

>100_bases
AAGTCGCAAATGGCTATGAATACACAGCAATAATGGAAAAAATCGCACCCAAAAAACTTGCAATGGAAGGCGATCCTATT
GGTTTGCAAGTAGGAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGL
AVIEKKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA
PSEKPVTWTKQEIFFGPCLLKEQSAIFKSKWRHEANTWQNIIQTISNNQPVSTENQAKIRELEHKIALVEDVLK

Sequences:

>Translated_234_residues
MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGL
AVIEKKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA
PSEKPVTWTKQEIFFGPCLLKEQSAIFKSKWRHEANTWQNIIQTISNNQPVSTENQAKIRELEHKIALVEDVLK
>Mature_234_residues
MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGL
AVIEKKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA
PSEKPVTWTKQEIFFGPCLLKEQSAIFKSKWRHEANTWQNIIQTISNNQPVSTENQAKIRELEHKIALVEDVLK

Specific function: Unknown

COG id: COG2384

COG function: function code R; Predicted SAM-dependent methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006901 [H]

Pfam domain/function: PF04816 DUF633 [H]

EC number: NA

Molecular weight: Translated: 26228; Mature: 26228

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQ
CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHH
KQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLI
HHHHHCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAPSEKPVTWTKQEIFFGPCLL
HCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHEECCHHH
KEQSAIFKSKWRHEANTWQNIIQTISNNQPVSTENQAKIRELEHKIALVEDVLK
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQ
CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHH
KQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLI
HHHHHCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAPSEKPVTWTKQEIFFGPCLL
HCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHEECCHHH
KEQSAIFKSKWRHEANTWQNIIQTISNNQPVSTENQAKIRELEHKIALVEDVLK
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]