BacMap

Definition	Listeria monocytogenes Clip81459, complete genome.
Accession	NC_012488
Length	2,912,690

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The map label for this gene is cshB [H]

Identifier: 226224051

GI number: 226224051

Start: 1465790

End: 1467097

Strand: Reverse

Name: cshB [H]

Synonym: Lm4b_01460

Alternate gene names: 226224051

Gene position: 1467097-1465790 (Counterclockwise)

Preceding gene: 226224053

Following gene: 226224050

Centisome position: 50.37

GC content: 37.54

Gene sequence:

>1308_bases
ATGACGAAGAAATCAAGGTTTGACCAATTTGGCTTTCAACCTTTTATTGGACTTGCAATAGATAAATTAGGATTCTATGA
GCCAACAGAAGTACAACAGAAGCTAATTCCAGGCATTTTAAAAGGGGAAAGTATCATTGGCCAATCTCAAACAGGTACAG
GGAAAACCCATACTTTTATTTTGCCAATTATTAACAATGTGAATCCTGAAAAAGATGCAGTACAAGCAGTTATTACGGCA
CCAAGTCGTGAGCTTGCTACTCAAATTTATAATGAAATTCGCAAAGTAACCAAATACAGCGAAAAAGAAATCGCTGTACA
ACTTGTTATTGGTGGCACAGACAAACAACGTGCGATTGATAAACTGAAAAAGCAACCACAAATCATTGTCGGAACGCCTG
GTCGTATCAATGACTTAATTCGTGAGCAAGCGTTATTTGTTCATACTGCTAAAACATTAGTTATTGACGAAGCAGATATG
ACACTTGATATGGGCTTCTTAAACGATGTCGACCATATTGCTGGAAAAATGCCGGCTAATTTACAAATGCTTGTTTTTTC
CGCTACAATTCCGCAAAAATTAAAACCATTTTTAAGCAAATATATGGAAAATCCACGTTATGAGCATATTCAGCCAAAAG
TGGCTGCTTCAAAAACAGTGGAACATCGCATTATGGCCACTCGTAGCCGTAATAAACTTGATTTACTTAAAAATGTTTTA
GTTGGTTCACAGCCTTATTTAGCGATTGTTTTTACAAATACAAAAACAACAGCTGATGAAGTAGCAAACGGTTTAATCGA
ACGTGGGCTAAAAGTAGCGAAAATCCATGGTGATGTAAACCCTCGTGAACGTAAACGGACGATGAAACAAATCGAAAACT
TAGATTATCAGTATGTTGTTGCGACAGATTTAGCTGCTCGTGGTATTGATATTCAAGGAATTAGTCATGTCGTGAACTAT
GAGTTGCCCGATGACTTAGATTTCTACATTCACCGTACTGGTCGTACTGGTCGTGCCGGACATTCTGGTATTGCACTTAC
ATTATTTGAACCAGCTGATGAAGACCGCTTAAACCAATTAGAAAAAATGGGAATCGAATTTAAGCACGTTGACTGGAAAA
ATAAAGAATTTGTTACACTTGAAGACCGCAACCGCCGTGCCAAACGTGAAGCGAAACGCGAAACAGCTGACCCTCGTGAA
ATCGGTATGCGTAAAAAAGCAAAACAAAAAGGTAAACCAAACTATAAAAAGAAAATTAACTACAAAATGAACGAAATCAA
ACGTCGTGAAAGACGGAAAAAACGATAA

Upstream 100 bases:

>100_bases
AGACTTAGCCTGTTTTTGACAAAGTTGTCTTAACACGCGCACGAATGTCCAATTATGTGCTATAATGGCTACTAGGTATA
GAACGGAGTGGAAATATTTT

Downstream 100 bases:

>100_bases
GTGAGGAATGAATTTATGCTAAGATTAGGTTCTCATGTATCAATGAGTGGTAAGAAAATGCTTCTTGGCGCAAGTGAAGA
GGCAGCTTCTTATGGCTCAA

Product: ATP-dependent RNA helicase, DEAD-box family (deaD)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFILPIINNVNPEKDAVQAVITA
PSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAIDKLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADM
TLDMGFLNDVDHIAGKMPANLQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVL
VGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVVATDLAARGIDIQGISHVVNY
ELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQLEKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPRE
IGMRKKAKQKGKPNYKKKINYKMNEIKRRERRKKR

Sequences:

>Translated_435_residues
MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFILPIINNVNPEKDAVQAVITA
PSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAIDKLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADM
TLDMGFLNDVDHIAGKMPANLQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVL
VGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVVATDLAARGIDIQGISHVVNY
ELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQLEKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPRE
IGMRKKAKQKGKPNYKKKINYKMNEIKRRERRKKR
>Mature_434_residues
TKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFILPIINNVNPEKDAVQAVITAP
SRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAIDKLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMT
LDMGFLNDVDHIAGKMPANLQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVLV
GSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVVATDLAARGIDIQGISHVVNYE
LPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQLEKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREI
GMRKKAKQKGKPNYKKKINYKMNEIKRRERRKKR

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=357, Percent_Identity=32.4929971988796, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI222352149, Length=406, Percent_Identity=31.0344827586207, Blast_Score=201, Evalue=8e-52,
Organism=Homo sapiens, GI13129006, Length=360, Percent_Identity=33.8888888888889, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=29.1891891891892, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI45446747, Length=365, Percent_Identity=34.2465753424658, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI45446743, Length=365, Percent_Identity=34.2465753424658, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI21071032, Length=376, Percent_Identity=31.1170212765957, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI41327771, Length=389, Percent_Identity=32.6478149100257, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=8e-49,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI31542656, Length=445, Percent_Identity=29.6629213483146, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI169881239, Length=350, Percent_Identity=33.4285714285714, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI13514809, Length=350, Percent_Identity=33.4285714285714, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI301171467, Length=348, Percent_Identity=32.183908045977, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI4503529, Length=357, Percent_Identity=33.6134453781513, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI87196351, Length=348, Percent_Identity=32.183908045977, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI301171475, Length=348, Percent_Identity=32.183908045977, Blast_Score=188, Evalue=8e-48,
Organism=Homo sapiens, GI50659095, Length=359, Percent_Identity=33.1476323119777, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI20149629, Length=407, Percent_Identity=31.4496314496315, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI83700235, Length=357, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=31.3390313390313, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI55749865, Length=415, Percent_Identity=27.9518072289157, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI164419743, Length=356, Percent_Identity=30.6179775280899, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI51094101, Length=356, Percent_Identity=30.6179775280899, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI188035877, Length=348, Percent_Identity=30.7471264367816, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI224593278, Length=337, Percent_Identity=30.2670623145401, Blast_Score=175, Evalue=8e-44,
Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=31.0541310541311, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=31.0541310541311, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI41327773, Length=350, Percent_Identity=31.7142857142857, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI256223453, Length=347, Percent_Identity=31.700288184438, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI41327779, Length=363, Percent_Identity=31.9559228650138, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=29.7450424929178, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI148613856, Length=350, Percent_Identity=29.1428571428571, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI38201710, Length=350, Percent_Identity=29.1428571428571, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI13514831, Length=375, Percent_Identity=28, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI41327776, Length=404, Percent_Identity=30.4455445544554, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI8922886, Length=355, Percent_Identity=29.2957746478873, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI6005743, Length=355, Percent_Identity=29.2957746478873, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI164419732, Length=343, Percent_Identity=29.1545189504373, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI62241022, Length=339, Percent_Identity=30.0884955752212, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI38327634, Length=363, Percent_Identity=29.4765840220386, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI9506931, Length=405, Percent_Identity=25.9259259259259, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI38569505, Length=346, Percent_Identity=30.0578034682081, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI38569503, Length=343, Percent_Identity=30.3206997084548, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI62241024, Length=317, Percent_Identity=30.2839116719243, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI17505907, Length=464, Percent_Identity=23.7068965517241, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=28.7425149700599, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI256773275, Length=388, Percent_Identity=27.0618556701031, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=26.9480519480519, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI154759257, Length=399, Percent_Identity=26.3157894736842, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI20336298, Length=195, Percent_Identity=30.2564102564103, Blast_Score=89, Evalue=6e-18,
Organism=Escherichia coli, GI87082221, Length=376, Percent_Identity=34.5744680851064, Blast_Score=238, Evalue=8e-64,
Organism=Escherichia coli, GI1787016, Length=363, Percent_Identity=37.1900826446281, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI1787605, Length=366, Percent_Identity=34.9726775956284, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1790214, Length=354, Percent_Identity=32.2033898305085, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI1788930, Length=341, Percent_Identity=34.0175953079179, Blast_Score=185, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI71995724, Length=357, Percent_Identity=32.4929971988796, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507121, Length=357, Percent_Identity=32.2128851540616, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71987143, Length=360, Percent_Identity=32.5, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17507945, Length=343, Percent_Identity=33.5276967930029, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17510307, Length=372, Percent_Identity=33.6021505376344, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17510309, Length=372, Percent_Identity=33.6021505376344, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71995514, Length=372, Percent_Identity=33.6021505376344, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=29.0858725761773, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI17555296, Length=415, Percent_Identity=28.433734939759, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=30.8900523560209, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71995718, Length=393, Percent_Identity=31.0432569974555, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17552642, Length=368, Percent_Identity=32.8804347826087, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17507877, Length=378, Percent_Identity=34.6560846560847, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17537549, Length=372, Percent_Identity=30.1075268817204, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI86570094, Length=361, Percent_Identity=31.3019390581717, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=28.1159420289855, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17507879, Length=364, Percent_Identity=34.8901098901099, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=28.1159420289855, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=31.0344827586207, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17507881, Length=362, Percent_Identity=33.4254143646409, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17510559, Length=375, Percent_Identity=28, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=327, Percent_Identity=30.8868501529052, Blast_Score=164, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI115533224, Length=376, Percent_Identity=29.2553191489362, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=28.6842105263158, Blast_Score=161, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=29.925187032419, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17536099, Length=389, Percent_Identity=27.5064267352185, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17536101, Length=389, Percent_Identity=27.5064267352185, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=29.1777188328912, Blast_Score=148, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=27.8820375335121, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=27.8820375335121, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17505370, Length=348, Percent_Identity=30.7471264367816, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=27.8215223097113, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=29.5039164490862, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17553716, Length=340, Percent_Identity=25.2941176470588, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=443, Percent_Identity=25.2821670428894, Blast_Score=135, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI71990816, Length=354, Percent_Identity=29.0960451977401, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI17508543, Length=368, Percent_Identity=27.445652173913, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17556951, Length=335, Percent_Identity=28.3582089552239, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=33.6585365853659, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=436, Percent_Identity=23.6238532110092, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=24.773413897281, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17566630, Length=331, Percent_Identity=24.4712990936556, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=37.1134020618557, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325138, Length=350, Percent_Identity=35.1428571428571, Blast_Score=213, Evalue=7e-56,
Organism=Saccharomyces cerevisiae, GI6324778, Length=380, Percent_Identity=32.1052631578947, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=34.375, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=31.404958677686, Blast_Score=206, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6323021, Length=395, Percent_Identity=33.1645569620253, Blast_Score=199, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6320041, Length=366, Percent_Identity=30.8743169398907, Blast_Score=196, Evalue=7e-51,
Organism=Saccharomyces cerevisiae, GI6324620, Length=393, Percent_Identity=32.3155216284987, Blast_Score=186, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6321360, Length=353, Percent_Identity=33.9943342776204, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6320119, Length=365, Percent_Identity=31.7808219178082, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6320449, Length=367, Percent_Identity=32.1525885558583, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=32.8729281767956, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6320173, Length=403, Percent_Identity=28.287841191067, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=421, Percent_Identity=28.2660332541568, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6322912, Length=341, Percent_Identity=32.5513196480938, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6322323, Length=341, Percent_Identity=32.5513196480938, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6322427, Length=355, Percent_Identity=30.9859154929577, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6321963, Length=378, Percent_Identity=30.1587301587302, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=370, Percent_Identity=32.1621621621622, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6323947, Length=375, Percent_Identity=28.2666666666667, Blast_Score=160, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=27.5132275132275, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321267, Length=427, Percent_Identity=28.5714285714286, Blast_Score=141, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6319618, Length=404, Percent_Identity=26.4851485148515, Blast_Score=139, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=23.8207547169811, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6322876, Length=216, Percent_Identity=30.0925925925926, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6324366, Length=156, Percent_Identity=25.6410256410256, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24583281, Length=370, Percent_Identity=31.3513513513514, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24583279, Length=370, Percent_Identity=31.3513513513514, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24645031, Length=340, Percent_Identity=33.2352941176471, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24584399, Length=339, Percent_Identity=34.5132743362832, Blast_Score=201, Evalue=9e-52,
Organism=Drosophila melanogaster, GI21355075, Length=357, Percent_Identity=33.6134453781513, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=33.1536388140162, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=31.3351498637602, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI28574962, Length=372, Percent_Identity=30.6451612903226, Blast_Score=188, Evalue=6e-48,
Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=32.425068119891, Blast_Score=184, Evalue=9e-47,
Organism=Drosophila melanogaster, GI24642151, Length=339, Percent_Identity=33.0383480825959, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=30.8900523560209, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI28575014, Length=359, Percent_Identity=31.1977715877437, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24582080, Length=351, Percent_Identity=31.6239316239316, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24582078, Length=351, Percent_Identity=31.6239316239316, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI17136248, Length=351, Percent_Identity=31.6239316239316, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24582075, Length=351, Percent_Identity=31.6239316239316, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24585582, Length=399, Percent_Identity=30.0751879699248, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24644479, Length=359, Percent_Identity=29.8050139275766, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24644483, Length=359, Percent_Identity=29.8050139275766, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI281361218, Length=359, Percent_Identity=29.8050139275766, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24644481, Length=359, Percent_Identity=29.8050139275766, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24644487, Length=359, Percent_Identity=29.8050139275766, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI45551833, Length=359, Percent_Identity=29.8050139275766, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24644485, Length=359, Percent_Identity=29.8050139275766, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI17136814, Length=363, Percent_Identity=31.404958677686, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=32.4786324786325, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=32.4786324786325, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=32.4786324786325, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI21356161, Length=352, Percent_Identity=30.3977272727273, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI18857967, Length=357, Percent_Identity=30.2521008403361, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI28571808, Length=367, Percent_Identity=31.0626702997275, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI28571809, Length=367, Percent_Identity=31.0626702997275, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI17647335, Length=343, Percent_Identity=30.9037900874636, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24668515, Length=364, Percent_Identity=29.9450549450549, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24666101, Length=421, Percent_Identity=29.4536817102138, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24642822, Length=392, Percent_Identity=27.2959183673469, Blast_Score=148, Evalue=9e-36,
Organism=Drosophila melanogaster, GI281365720, Length=321, Percent_Identity=29.2834890965732, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=29.9435028248588, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI21355559, Length=375, Percent_Identity=27.4666666666667, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24643725, Length=398, Percent_Identity=26.6331658291457, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI20130173, Length=445, Percent_Identity=23.1460674157303, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28571338, Length=223, Percent_Identity=31.8385650224215, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI18859659, Length=223, Percent_Identity=31.8385650224215, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=21.875, Blast_Score=97, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49652; Mature: 49521

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFI
CCCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHCCCCCCCCCCCEEEE
LPIINNVNPEKDAVQAVITAPSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAID
EEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHH
KLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGKMPAN
HHHCCCEEEEECCCHHHHHHHHHHHHEEEHEEEEEECCCCEEECHHHCCHHHHHCCCCCC
LQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVL
EEEEEEECCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVV
CCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEE
ATDLAARGIDIQGISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQL
EEHHHHCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHH
EKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREIGMRKKAKQKGKPNYKKKIN
HHCCCEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCC
YKMNEIKRRERRKKR
CHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFI
CCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHCCCCCCCCCCCEEEE
LPIINNVNPEKDAVQAVITAPSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAID
EEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHH
KLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGKMPAN
HHHCCCEEEEECCCHHHHHHHHHHHHEEEHEEEEEECCCCEEECHHHCCHHHHHCCCCCC
LQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVL
EEEEEEECCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVV
CCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEE
ATDLAARGIDIQGISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQL
EEHHHHCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHH
EKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREIGMRKKAKQKGKPNYKKKIN
HHCCCEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCC
YKMNEIKRRERRKKR
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]