| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224011
Identifier: 226224011
GI number: 226224011
Start: 1424459
End: 1425007
Strand: Direct
Name: 226224011
Synonym: Lm4b_01419
Alternate gene names: NA
Gene position: 1424459-1425007 (Clockwise)
Preceding gene: 226224010
Following gene: 226224012
Centisome position: 48.91
GC content: 28.6
Gene sequence:
>549_bases ATGAAAATAAAACGATTACAAAAAGTAAGTTATTTTCTACATATTGCACTTAAAATTTTATCGATCAGTTCGGTAATAAT GACTATAATAGTTGTTTTAATGAAGTTTTTTAGTAGTAAAAATATTATGATGAATAAATTAGAATCAGATACTGTATTTT ATTTTCAAACAGAATTTTTTTCTGGTGTGGAAAATCAACAATATAATCAAATTGAGGAATGGATTTTAGTAGTTATAGCT GCTTTTTCTAGTGTTTTAATAGCATTGCTACTATGGACCGCAAGTATGATTTTTAAAGATTTAGCTGCTGAGTTTATGCC TTTTAGCGATCTTACTGTTAACAGATTGCGGAGAATTGCAGGGATATTGCTTGTCTATTCGCTAGCACCGCAAATTATGT ATTCTGTTTTACATACAGTACTCATACCGGGTTATAGCATTACTTTTGGTTTGAATATGTCATTTTTCTTTGCAATTATT TTTTATTGTTTAACTGAAATATTTCGTTATGGAGCATCTTTGCAAAAAGAATCCGACGAAACTTTATGA
Upstream 100 bases:
>100_bases TTTTTTATGCTAAAAGTTAATTATTTAATGATTATCGTTAAAAATTATTGACATTTTATCTTTCTTTTAGGTATAATCTA GAAAAAAGGGAGCGATTATT
Downstream 100 bases:
>100_bases TTGGAGCGAAAAAACAATGGCAATTGTATTGAGGCTAGATCGAGTAATGGCCGACCGTAAAATGTCTTTAAACCAGTTAT CCCAAGAAGTTGGTGTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFFSGVENQQYNQIEEWILVVIA AFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIAGILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAII FYCLTEIFRYGASLQKESDETL
Sequences:
>Translated_182_residues MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFFSGVENQQYNQIEEWILVVIA AFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIAGILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAII FYCLTEIFRYGASLQKESDETL >Mature_182_residues MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFFSGVENQQYNQIEEWILVVIA AFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIAGILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAII FYCLTEIFRYGASLQKESDETL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20998; Mature: 20998
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHH SGVENQQYNQIEEWILVVIAAFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAIIFYCLTEIFRYGASLQKESDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHCCCCCC TL CC >Mature Secondary Structure MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHH SGVENQQYNQIEEWILVVIAAFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAIIFYCLTEIFRYGASLQKESDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHCCCCCC TL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA