Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226224011

Identifier: 226224011

GI number: 226224011

Start: 1424459

End: 1425007

Strand: Direct

Name: 226224011

Synonym: Lm4b_01419

Alternate gene names: NA

Gene position: 1424459-1425007 (Clockwise)

Preceding gene: 226224010

Following gene: 226224012

Centisome position: 48.91

GC content: 28.6

Gene sequence:

>549_bases
ATGAAAATAAAACGATTACAAAAAGTAAGTTATTTTCTACATATTGCACTTAAAATTTTATCGATCAGTTCGGTAATAAT
GACTATAATAGTTGTTTTAATGAAGTTTTTTAGTAGTAAAAATATTATGATGAATAAATTAGAATCAGATACTGTATTTT
ATTTTCAAACAGAATTTTTTTCTGGTGTGGAAAATCAACAATATAATCAAATTGAGGAATGGATTTTAGTAGTTATAGCT
GCTTTTTCTAGTGTTTTAATAGCATTGCTACTATGGACCGCAAGTATGATTTTTAAAGATTTAGCTGCTGAGTTTATGCC
TTTTAGCGATCTTACTGTTAACAGATTGCGGAGAATTGCAGGGATATTGCTTGTCTATTCGCTAGCACCGCAAATTATGT
ATTCTGTTTTACATACAGTACTCATACCGGGTTATAGCATTACTTTTGGTTTGAATATGTCATTTTTCTTTGCAATTATT
TTTTATTGTTTAACTGAAATATTTCGTTATGGAGCATCTTTGCAAAAAGAATCCGACGAAACTTTATGA

Upstream 100 bases:

>100_bases
TTTTTTATGCTAAAAGTTAATTATTTAATGATTATCGTTAAAAATTATTGACATTTTATCTTTCTTTTAGGTATAATCTA
GAAAAAAGGGAGCGATTATT

Downstream 100 bases:

>100_bases
TTGGAGCGAAAAAACAATGGCAATTGTATTGAGGCTAGATCGAGTAATGGCCGACCGTAAAATGTCTTTAAACCAGTTAT
CCCAAGAAGTTGGTGTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFFSGVENQQYNQIEEWILVVIA
AFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIAGILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAII
FYCLTEIFRYGASLQKESDETL

Sequences:

>Translated_182_residues
MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFFSGVENQQYNQIEEWILVVIA
AFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIAGILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAII
FYCLTEIFRYGASLQKESDETL
>Mature_182_residues
MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFFSGVENQQYNQIEEWILVVIA
AFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIAGILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAII
FYCLTEIFRYGASLQKESDETL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20998; Mature: 20998

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHH
SGVENQQYNQIEEWILVVIAAFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAIIFYCLTEIFRYGASLQKESDE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHCCCCCC
TL
CC
>Mature Secondary Structure
MKIKRLQKVSYFLHIALKILSISSVIMTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHH
SGVENQQYNQIEEWILVVIAAFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFAIIFYCLTEIFRYGASLQKESDE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHCCCCCC
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA