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The map label for this gene is tcsA

Identifier: 226223989

GI number: 226223989

Start: 1397351

End: 1398424

Strand: Direct

Name: tcsA

Synonym: Lm4b_01397

Alternate gene names: 226223989

Gene position: 1397351-1398424 (Clockwise)

Preceding gene: 226223987

Following gene: 226223990

Centisome position: 47.97

GC content: 38.08

Gene sequence:

>1074_bases
GTGAAAAAGCGTACATTTGCTTTAGCACTATCAATGATTATTGCTTCTGGCGTTATCCTAGGTGCTTGTGGTTCGAGTAG
CGACGATAAAAAAAGTAGCGATGATAAGAGCAGTAAAGATTTTACAGTAGCAATGGTTACAGATACTGGTGGCGTTGATG
ACCGTTCGTTTAACCAATCAGCATGGGAAGGCTTACAAAAATTTGGTAAAGCTAACGACATGGAAAAAGGTACAGATGGT
TACAACTACTTGCAATCAGCTTCTGAAGCAGACTACAAAACAAACTTAAACACTGCTGTTCGTAGCGATTATGATTTAAT
TTATGGAATTGGTTACAAACTGAAAGATGCAATTGAAGAAGTTTCTAAACAAAAACCTAAAAATCAATTCGCTATTGTTG
ATGACACAATTGATGACCGTGATAATGTAGTAAGTATTGGATTTAAAGATAACGATGGTTCTTATCTAGTTGGTGTAGTA
GCTGGCTTAACAACAAAAACAAATAAAGTTGGATTTGTTGGTGGAGTAAAAGGAACTGTTATCGACCGTTTTGAAGCTGG
TTTCACTGCTGGTGTAAAAGCTGTTAATCCTAACGCACAAATTGATGTACAATATGCAAACGATTTCGCTAAAGCAGACA
AAGGACAACAAATCGCTTCTTCCATGTATTCAAGTGGAGTTGACGTAATTTTCCATGCTGCTGGTGGTACTGGTAACGGT
GTCTTTGCAGAAGCTAAAAACCTGAAGAAAAAAGATCCTAGCCGTGCTGTTTGGGTAATCGGTGTTGACCGTGACCAATG
GGACGAAGGAAAAGTTACAGCAAACGATGGCAAAGATTACAATGTAACTCTTACATCTGAAATCAAACGTGTTGATATCG
CTGTAGAAGACCTTGCAACTCGTGCTAAAGCTGGAGATTTCCCAGGCGGAACTAAAATTGAATACGGTCTTGATAAAGAT
GCTGTAGGGCTTTCTGAACATCAAGATAATATTTCTAAAGACGTTCTTGCTAAAGTAGAAGAGTACAAACAAAAAATCGT
TGATGGGGACATTAAAGTTCCAGAAAAACCTTGA

Upstream 100 bases:

>100_bases
TCCGAAAAAGGGACCATACATAATTTTTTAATACGCGCCTGAATGTTTGTTTTGACAGAAAGCTCTGACTAACATTATAT
CTCTCGGGAGGGGTTTTAAG

Downstream 100 bases:

>100_bases
TTTTATAGTTATAAAAAATGAGTAATATGAACGAAGTAAAACCTTTTATGAAAGTCGGTATCAAACGTACCGGCTTTCAT
AAAAAAATAATTTGTAAGCG

Product: CD4+ T cell-stimulating antigen, lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVAMVTDTGGVDDRSFNQSAWEGLQKFGKANDMEKGTDG
YNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKD
AVGLSEHQDNISKDVLAKVEEYKQKIVDGDIKVPEKP

Sequences:

>Translated_357_residues
MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVAMVTDTGGVDDRSFNQSAWEGLQKFGKANDMEKGTDG
YNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKD
AVGLSEHQDNISKDVLAKVEEYKQKIVDGDIKVPEKP
>Mature_357_residues
MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVAMVTDTGGVDDRSFNQSAWEGLQKFGKANDMEKGTDG
YNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKD
AVGLSEHQDNISKDVLAKVEEYKQKIVDGDIKVPEKP

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38415; Mature: 38415

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVAMVTDTGGVDDRSFNQS
CCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHH
AWEGLQKFGKANDMEKGTDGYNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEE
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCHHHHHHHHH
VSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVVAGLTTKTNKVGFVGGVKGTV
HHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCHH
IDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
HHHHHCCHHCCCEEECCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCC
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLAT
EEHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEHHHHHHHHHH
RAKAGDFPGGTKIEYGLDKDAVGLSEHQDNISKDVLAKVEEYKQKIVDGDIKVPEKP
HHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVAMVTDTGGVDDRSFNQS
CCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHH
AWEGLQKFGKANDMEKGTDGYNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEE
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCHHHHHHHHH
VSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVVAGLTTKTNKVGFVGGVKGTV
HHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCHH
IDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
HHHHHCCHHCCCEEECCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCC
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLAT
EEHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEHHHHHHHHHH
RAKAGDFPGGTKIEYGLDKDAVGLSEHQDNISKDVLAKVEEYKQKIVDGDIKVPEKP
HHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]