Click here to switch to the map view.

The map label for this gene is comGB

Identifier: 226223947

GI number: 226223947

Start: 1354140

End: 1355171

Strand: Reverse

Name: comGB

Synonym: Lm4b_01354b

Alternate gene names: 226223947

Gene position: 1355171-1354140 (Counterclockwise)

Preceding gene: 226223948

Following gene: 226223946

Centisome position: 46.53

GC content: 32.95

Gene sequence:

>1032_bases
ATGGTTTTTTTTCAGCGCACTAATTGGAAAGAGGACGGAGAATTTTTAATTAGAGTTGCCAGTTTACTCGAAAAGGGATT
CTCATTAGATGCGACCATTAGCTATTTAAGCATTACTTCGCCCAAATATCGCAAAAGATATGAACAAATTATCACTTCAC
TTGCAAACGGAAATTCTTTTTCCTATGCTCTTTCAAAAAACGGATTTCCTGAATTCATTTGTTCACAACTTCATTATGCT
TCTAGTCACGGTTACTTTTTGCAAACAATTCACGAAACCGGCGTCCATATGAAAAGAAAAGCGGAGGAAAAAAACGCATT
AATGAAGACCTTCCAATATCCACTAGTCTTATTCTCTACTGTTATTCTGGTGTTCTTCTTGCTTCGAATTTTTCTCTTAC
CTAAATTCGAACTTTTATTTACACAATTATCAACTAACGGCACAGTCGGAACTAAATTCACTTATTTCCTGCTTGAAAAA
ATTCCAGTTTTATTAGGAATTTTTTTACTTAGCCTTTTTCTAATCTTCAGTTTCCTTATTCGAAAACAAAAGCAAAAAAA
TGCTTACGACCGAGCTTATTTTTATTGTCGAATTCCATATATTCGCCAATTTTCAAGAATTCATTATTCGCAATACCTTT
CGCGCGAACTTGGATATCTGCTGAAAAGCGGTTTATCTATAACGCATATTATGCACCTCTTCGCGCAAGAAGAATCGCCC
GCATTCTTTCAAGCAATCGCCAGGCAAATCCTTCCTACGCTTGAACAAGGATTATCACTAACAAAAGCACTAGAAAAAAT
GCCTATATTTGAAAGAGAACTTTATTACATTGCTATCCACGGTGAAAAAAATGGTAATTTAGCAGAAGAATTTTTATTTT
ATTATAACTTATGTCATCAGAAATCACTTCAAAAGACCGAAAAATTATTTTCATTTATCCAACCAATTGTTTTTATCGTT
ATTGGTATTTTAATTGTATCCATTTATTTATCCATTTTATATCCCATGTTTTCTATGGTAAATCAAATTTAA

Upstream 100 bases:

>100_bases
GTTCTTACGCAACAAGAGATAAAAGCCTATTTCCAATCTAATAAACAGCAGATTAAGCCTAAATACCCTATTAAAAGAAC
ATTCGAGAAAGGAGTTGCCT

Downstream 100 bases:

>100_bases
AAGGAGGAGTTTTAATGTTTAAAAAGAAAATTGATTGGCGAGATGAGCGAGGCTTTACTTTGGTGGAGATGTTAATTGTA
TTGTTAGTGGTTAGTGTTTT

Product: comG operon protein 2 (ComGB)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MVFFQRTNWKEDGEFLIRVASLLEKGFSLDATISYLSITSPKYRKRYEQIITSLANGNSFSYALSKNGFPEFICSQLHYA
SSHGYFLQTIHETGVHMKRKAEEKNALMKTFQYPLVLFSTVILVFFLLRIFLLPKFELLFTQLSTNGTVGTKFTYFLLEK
IPVLLGIFLLSLFLIFSFLIRKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELGYLLKSGLSITHIMHLFAQEESP
AFFQAIARQILPTLEQGLSLTKALEKMPIFERELYYIAIHGEKNGNLAEEFLFYYNLCHQKSLQKTEKLFSFIQPIVFIV
IGILIVSIYLSILYPMFSMVNQI

Sequences:

>Translated_343_residues
MVFFQRTNWKEDGEFLIRVASLLEKGFSLDATISYLSITSPKYRKRYEQIITSLANGNSFSYALSKNGFPEFICSQLHYA
SSHGYFLQTIHETGVHMKRKAEEKNALMKTFQYPLVLFSTVILVFFLLRIFLLPKFELLFTQLSTNGTVGTKFTYFLLEK
IPVLLGIFLLSLFLIFSFLIRKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELGYLLKSGLSITHIMHLFAQEESP
AFFQAIARQILPTLEQGLSLTKALEKMPIFERELYYIAIHGEKNGNLAEEFLFYYNLCHQKSLQKTEKLFSFIQPIVFIV
IGILIVSIYLSILYPMFSMVNQI
>Mature_343_residues
MVFFQRTNWKEDGEFLIRVASLLEKGFSLDATISYLSITSPKYRKRYEQIITSLANGNSFSYALSKNGFPEFICSQLHYA
SSHGYFLQTIHETGVHMKRKAEEKNALMKTFQYPLVLFSTVILVFFLLRIFLLPKFELLFTQLSTNGTVGTKFTYFLLEK
IPVLLGIFLLSLFLIFSFLIRKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELGYLLKSGLSITHIMHLFAQEESP
AFFQAIARQILPTLEQGLSLTKALEKMPIFERELYYIAIHGEKNGNLAEEFLFYYNLCHQKSLQKTEKLFSFIQPIVFIV
IGILIVSIYLSILYPMFSMVNQI

Specific function: Required for transformation and DNA binding [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 40149; Mature: 40149

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFFQRTNWKEDGEFLIRVASLLEKGFSLDATISYLSITSPKYRKRYEQIITSLANGNSF
CEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCE
SYALSKNGFPEFICSQLHYASSHGYFLQTIHETGVHMKRKAEEKNALMKTFQYPLVLFST
EEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VILVFFLLRIFLLPKFELLFTQLSTNGTVGTKFTYFLLEKIPVLLGIFLLSLFLIFSFLI
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELGYLLKSGLSITHIMHLFAQEESP
HHHHHCCHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
AFFQAIARQILPTLEQGLSLTKALEKMPIFERELYYIAIHGEKNGNLAEEFLFYYNLCHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEEEEEECCCCCCHHHHHHHHHHHHHH
KSLQKTEKLFSFIQPIVFIVIGILIVSIYLSILYPMFSMVNQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFFQRTNWKEDGEFLIRVASLLEKGFSLDATISYLSITSPKYRKRYEQIITSLANGNSF
CEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCE
SYALSKNGFPEFICSQLHYASSHGYFLQTIHETGVHMKRKAEEKNALMKTFQYPLVLFST
EEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VILVFFLLRIFLLPKFELLFTQLSTNGTVGTKFTYFLLEKIPVLLGIFLLSLFLIFSFLI
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELGYLLKSGLSITHIMHLFAQEESP
HHHHHCCHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
AFFQAIARQILPTLEQGLSLTKALEKMPIFERELYYIAIHGEKNGNLAEEFLFYYNLCHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEEEEEECCCCCCHHHHHHHHHHHHHH
KSLQKTEKLFSFIQPIVFIVIGILIVSIYLSILYPMFSMVNQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11058132; 10086841 [H]