| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223216
Identifier: 226223216
GI number: 226223216
Start: 630152
End: 632617
Strand: Direct
Name: 226223216
Synonym: Lm4b_00613
Alternate gene names: NA
Gene position: 630152-632617 (Clockwise)
Preceding gene: 226223215
Following gene: 226223217
Centisome position: 21.63
GC content: 40.27
Gene sequence:
>2466_bases TTGGCTTTCAAAAAATTAATACTTGTATTGACCATTGCGGCTCTTTTTCTTGGTTTTAAAATAGTGGTAGCAGCGGAAAA TGGGAGTAGGGACTTAGCATCAAATGAAGCGATAGTGACTAATTTTACAGAATTAAAAACAGCTATTTCCGAAGATAATG GAATAGATACAGTGTATTTAGGTGCAGATGTTGAATTGTCGGGTGGAATTATCATCCCAGCGACGAAAAAGACATTTACT TTATCAGGAAAAAATCCAGCAACAGGTGAAATACATACTTTGACAGAAACAATGGCATCAGCTGGTGCCCAGAGCAGCGT GATTACAGTTAATACCAACACAGGTGCAAAAGAGACAACTTTAAGAGATATTAATGTTGTGGGGAAAAATTATTATGGGA CGATTTCGGTTTATGGGGCTGCAAAAAACGTCGTACAAAACTATGAAAATGTTCACTATCAAGGTCCGCAAATGATATAT AATTTGAATGGAACGGCGAATTTTAAAGGAACCAATGATATAACAATAGCGTCCGTTGTATCTGGTTCTGCGGCACCAAA TGAAGTCGCGGAAATTAAAGGCGTGAGCGTTTCCGGTAAGTTGAATATCAATCACGCAAGTTCGAATGCGAATAGTGCTT TTTGGTTCGGTGGTGGAACGGCTGAGGTAAACACTTTTACAGTGGAAGAAAATGCAGAGGTGACGATACTTTCTAATGGG ACTGGGATGTTTTATCGTTCAGGGACAAAACCAATTGATATAGATGTGAAAAAGAATGCGAAGTTAGCTATTACTTCTAA CAATAATATTTTCCGAGACACGCCGGGCGGAGCTGTTAAAATCGCGTCAGGTGCGGATGTAACTATGACAAAAACTGCTG GCGGGAATCCACTTCTATGGGTGGCAGATGATATTACCGTAAGTCCTGATGCCCGCTTTATCTTGAATAAAACAGGCGGA ACTGGCTATATTATCCAGTTTTATAATGCGACGGCGAAGTTAGATATAAATGATCCTCGGAGCTTTTTAATTACGACAAA TTCAAATACGCCGATGTTTTACTGGCCTTATGCGAACACCTTTAATTTAAATGCGCAAATGGTGAATTACTGGGATACGG TTGGAACCATTGATCGAACGGATTTGGCAGCGCAAAGTTTTAGTTTACCAAATGGGGAAAATGTGACGGGGAGTTTGACG TACACTGGGACAACGACAAAAATTCTGTCAACGAATGCGGGGATGACGCCGACTAATTTTAATCAAAACACCGCGCGAAT GATTGCAATGGGGCGACTTGAAGGAACGATAAATCCTGTGACAGACGTAGATAATGAAATTACAGGAACAGCGACACCAA ACGCTTTTATAAGTATTTCATACACAGAAAATGGGGAAAATAAGGTTTTAGAAGGACAGGCAAATGAGGCGGGAACTTAT CGAATTGCTATTCCAAACGGTTTTATCAAGCCTTACATTAAATTGACTACAACCATTAAACAAGACCAAAAAAGGATAAC ATTAGACGATATAACTGTAGAAGATGTGACTCCGCCAAGTGGTGAGGCTGTTACTCAAATTATCCAACTTGGAGATCCCT TTCCAGATGTAGCCGAATTAGTAACAAATATTTATGATCATTCCGATAATACATCTGGAGCGGGAGTTACAACTACTTTA CAAAGCGCGCCCGATACTAATGTATTTGGACCCACAGAAGCCATTGTTCGCTTAGAAGATAAGGCACAAAATTACGTGGA TATCCGTGTACCCGTTTTTATTAAAGATGATGAAACAGAGATACAAGATGGCAAAGCATTACGAGCGGCGGACTTTTCGG TAAATGTAAAAGATATTATCGAGCTCAATGATGCCGAACTGGAGCAATTCATTTTAAGCAAATCGGGTGCAAAAGCTTTC AATATCGAAACTGGTGAGGACTTAAGCGCGGAGTTGAAAGTAGCTAGCACCAATTTGAAAAAAGAGACAGGCACCTATGC GGCAACGATACAAATTGACGGATTAACGAAAGAGATTGCGATTCAGGTTACGGGTGAGCTTAAATTTAATCATGTGCCAG AAACGATTTCCTTCGAAACAATGGAGCTTAATCAACAAAAAAATATCGCAAAACGAAACGCTGACTTTGATTTATCTGTG CTTGATTCAAGAGGCTCAGGCGGCAAATTTAGCGTAACAGCAACCGTTAAAACACCGCTGACATCCACGATAAATTCGGC GCATACTTTGCCAAATGGGCTCATTTTTATTGATAATACTGGAGCGAAAAAAATTCTTTCCGCTGAACCAATCACCATTT TTGAATCGCAGTCAGCTAGTGAGATGATTGTTCCGATAGAATGGGCAGAAGACCAAGGGATTTTGGTAGAAGTTGATGTA GCGGAGGCTTATGTGGATGAAAGCTATGAAACAACAATCGAGTGGACTTTGACGGATGCTCCGTAA
Upstream 100 bases:
>100_bases TTGCGATTGTTGCAGGTGTGGTTCTTATAGCACTAATCATCATTTTGGTTATAAGAAAACGAAGACAAAAACAAGAAAAA TAAAGAAAGGAGCTGGCGAA
Downstream 100 bases:
>100_bases AAACCTGTTAGCAAAAGTTAACAGGTTTTTTCATGTTATAAGCCCATTGTTTTCTAAATACACTAGTTTCTCGTATAATA GCGTTAAGTAATTTGCGAAA
Product: secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 821; Mature: 820
Protein sequence:
>821_residues MAFKKLILVLTIAALFLGFKIVVAAENGSRDLASNEAIVTNFTELKTAISEDNGIDTVYLGADVELSGGIIIPATKKTFT LSGKNPATGEIHTLTETMASAGAQSSVITVNTNTGAKETTLRDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIY NLNGTANFKGTNDITIASVVSGSAAPNEVAEIKGVSVSGKLNINHASSNANSAFWFGGGTAEVNTFTVEENAEVTILSNG TGMFYRSGTKPIDIDVKKNAKLAITSNNNIFRDTPGGAVKIASGADVTMTKTAGGNPLLWVADDITVSPDARFILNKTGG TGYIIQFYNATAKLDINDPRSFLITTNSNTPMFYWPYANTFNLNAQMVNYWDTVGTIDRTDLAAQSFSLPNGENVTGSLT YTGTTTKILSTNAGMTPTNFNQNTARMIAMGRLEGTINPVTDVDNEITGTATPNAFISISYTENGENKVLEGQANEAGTY RIAIPNGFIKPYIKLTTTIKQDQKRITLDDITVEDVTPPSGEAVTQIIQLGDPFPDVAELVTNIYDHSDNTSGAGVTTTL QSAPDTNVFGPTEAIVRLEDKAQNYVDIRVPVFIKDDETEIQDGKALRAADFSVNVKDIIELNDAELEQFILSKSGAKAF NIETGEDLSAELKVASTNLKKETGTYAATIQIDGLTKEIAIQVTGELKFNHVPETISFETMELNQQKNIAKRNADFDLSV LDSRGSGGKFSVTATVKTPLTSTINSAHTLPNGLIFIDNTGAKKILSAEPITIFESQSASEMIVPIEWAEDQGILVEVDV AEAYVDESYETTIEWTLTDAP
Sequences:
>Translated_821_residues MAFKKLILVLTIAALFLGFKIVVAAENGSRDLASNEAIVTNFTELKTAISEDNGIDTVYLGADVELSGGIIIPATKKTFT LSGKNPATGEIHTLTETMASAGAQSSVITVNTNTGAKETTLRDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIY NLNGTANFKGTNDITIASVVSGSAAPNEVAEIKGVSVSGKLNINHASSNANSAFWFGGGTAEVNTFTVEENAEVTILSNG TGMFYRSGTKPIDIDVKKNAKLAITSNNNIFRDTPGGAVKIASGADVTMTKTAGGNPLLWVADDITVSPDARFILNKTGG TGYIIQFYNATAKLDINDPRSFLITTNSNTPMFYWPYANTFNLNAQMVNYWDTVGTIDRTDLAAQSFSLPNGENVTGSLT YTGTTTKILSTNAGMTPTNFNQNTARMIAMGRLEGTINPVTDVDNEITGTATPNAFISISYTENGENKVLEGQANEAGTY RIAIPNGFIKPYIKLTTTIKQDQKRITLDDITVEDVTPPSGEAVTQIIQLGDPFPDVAELVTNIYDHSDNTSGAGVTTTL QSAPDTNVFGPTEAIVRLEDKAQNYVDIRVPVFIKDDETEIQDGKALRAADFSVNVKDIIELNDAELEQFILSKSGAKAF NIETGEDLSAELKVASTNLKKETGTYAATIQIDGLTKEIAIQVTGELKFNHVPETISFETMELNQQKNIAKRNADFDLSV LDSRGSGGKFSVTATVKTPLTSTINSAHTLPNGLIFIDNTGAKKILSAEPITIFESQSASEMIVPIEWAEDQGILVEVDV AEAYVDESYETTIEWTLTDAP >Mature_820_residues AFKKLILVLTIAALFLGFKIVVAAENGSRDLASNEAIVTNFTELKTAISEDNGIDTVYLGADVELSGGIIIPATKKTFTL SGKNPATGEIHTLTETMASAGAQSSVITVNTNTGAKETTLRDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIYN LNGTANFKGTNDITIASVVSGSAAPNEVAEIKGVSVSGKLNINHASSNANSAFWFGGGTAEVNTFTVEENAEVTILSNGT GMFYRSGTKPIDIDVKKNAKLAITSNNNIFRDTPGGAVKIASGADVTMTKTAGGNPLLWVADDITVSPDARFILNKTGGT GYIIQFYNATAKLDINDPRSFLITTNSNTPMFYWPYANTFNLNAQMVNYWDTVGTIDRTDLAAQSFSLPNGENVTGSLTY TGTTTKILSTNAGMTPTNFNQNTARMIAMGRLEGTINPVTDVDNEITGTATPNAFISISYTENGENKVLEGQANEAGTYR IAIPNGFIKPYIKLTTTIKQDQKRITLDDITVEDVTPPSGEAVTQIIQLGDPFPDVAELVTNIYDHSDNTSGAGVTTTLQ SAPDTNVFGPTEAIVRLEDKAQNYVDIRVPVFIKDDETEIQDGKALRAADFSVNVKDIIELNDAELEQFILSKSGAKAFN IETGEDLSAELKVASTNLKKETGTYAATIQIDGLTKEIAIQVTGELKFNHVPETISFETMELNQQKNIAKRNADFDLSVL DSRGSGGKFSVTATVKTPLTSTINSAHTLPNGLIFIDNTGAKKILSAEPITIFESQSASEMIVPIEWAEDQGILVEVDVA EAYVDESYETTIEWTLTDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88083; Mature: 87952
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKKLILVLTIAALFLGFKIVVAAENGSRDLASNEAIVTNFTELKTAISEDNGIDTVYL CCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEE GADVELSGGIIIPATKKTFTLSGKNPATGEIHTLTETMASAGAQSSVITVNTNTGAKETT ECCEEECCCEEEECCCEEEEECCCCCCCCEEEHHHHHHHHCCCCCEEEEEECCCCCCCEE LRDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIYNLNGTANFKGTNDITIASVV EEEEEEECCCEEEEEEEECCHHHHHHHHHCCEECCCEEEEECCCEEECCCCCCEEEEEEE SGSAAPNEVAEIKGVSVSGKLNINHASSNANSAFWFGGGTAEVNTFTVEENAEVTILSNG CCCCCCCCHHHEECEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCEEEEEECC TGMFYRSGTKPIDIDVKKNAKLAITSNNNIFRDTPGGAVKIASGADVTMTKTAGGNPLLW CEEEEECCCCEEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCEEEEECCCCCEEEE VADDITVSPDARFILNKTGGTGYIIQFYNATAKLDINDPRSFLITTNSNTPMFYWPYANT EECCEEECCCCEEEEECCCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCEEECCCCCE FNLNAQMVNYWDTVGTIDRTDLAAQSFSLPNGENVTGSLTYTGTTTKILSTNAGMTPTNF EECCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCC NQNTARMIAMGRLEGTINPVTDVDNEITGTATPNAFISISYTENGENKVLEGQANEAGTY CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCEE RIAIPNGFIKPYIKLTTTIKQDQKRITLDDITVEDVTPPSGEAVTQIIQLGDPFPDVAEL EEECCCCCCCCEEEEEEEEECCCCEEEEECEEEECCCCCCCHHHHHHHHCCCCCHHHHHH VTNIYDHSDNTSGAGVTTTLQSAPDTNVFGPTEAIVRLEDKAQNYVDIRVPVFIKDDETE HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCC IQDGKALRAADFSVNVKDIIELNDAELEQFILSKSGAKAFNIETGEDLSAELKVASTNLK CCCCCEEEEEECCCCHHHEEECCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCC KETGTYAATIQIDGLTKEIAIQVTGELKFNHVPETISFETMELNQQKNIAKRNADFDLSV CCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCEEEE LDSRGSGGKFSVTATVKTPLTSTINSAHTLPNGLIFIDNTGAKKILSAEPITIFESQSAS EECCCCCCEEEEEEEEECCCHHHCCHHHCCCCCEEEEECCCCCCEECCCCEEEEECCCCC EMIVPIEWAEDQGILVEVDVAEAYVDESYETTIEWTLTDAP CEEEEEEECCCCCEEEEEEHHHHHHCCCCEEEEEEEECCCC >Mature Secondary Structure AFKKLILVLTIAALFLGFKIVVAAENGSRDLASNEAIVTNFTELKTAISEDNGIDTVYL CHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEE GADVELSGGIIIPATKKTFTLSGKNPATGEIHTLTETMASAGAQSSVITVNTNTGAKETT ECCEEECCCEEEECCCEEEEECCCCCCCCEEEHHHHHHHHCCCCCEEEEEECCCCCCCEE LRDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIYNLNGTANFKGTNDITIASVV EEEEEEECCCEEEEEEEECCHHHHHHHHHCCEECCCEEEEECCCEEECCCCCCEEEEEEE SGSAAPNEVAEIKGVSVSGKLNINHASSNANSAFWFGGGTAEVNTFTVEENAEVTILSNG CCCCCCCCHHHEECEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCEEEEEECC TGMFYRSGTKPIDIDVKKNAKLAITSNNNIFRDTPGGAVKIASGADVTMTKTAGGNPLLW CEEEEECCCCEEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCEEEEECCCCCEEEE VADDITVSPDARFILNKTGGTGYIIQFYNATAKLDINDPRSFLITTNSNTPMFYWPYANT EECCEEECCCCEEEEECCCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCEEECCCCCE FNLNAQMVNYWDTVGTIDRTDLAAQSFSLPNGENVTGSLTYTGTTTKILSTNAGMTPTNF EECCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCC NQNTARMIAMGRLEGTINPVTDVDNEITGTATPNAFISISYTENGENKVLEGQANEAGTY CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCEE RIAIPNGFIKPYIKLTTTIKQDQKRITLDDITVEDVTPPSGEAVTQIIQLGDPFPDVAEL EEECCCCCCCCEEEEEEEEECCCCEEEEECEEEECCCCCCCHHHHHHHHCCCCCHHHHHH VTNIYDHSDNTSGAGVTTTLQSAPDTNVFGPTEAIVRLEDKAQNYVDIRVPVFIKDDETE HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCC IQDGKALRAADFSVNVKDIIELNDAELEQFILSKSGAKAFNIETGEDLSAELKVASTNLK CCCCCEEEEEECCCCHHHEEECCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCC KETGTYAATIQIDGLTKEIAIQVTGELKFNHVPETISFETMELNQQKNIAKRNADFDLSV CCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCEEEE LDSRGSGGKFSVTATVKTPLTSTINSAHTLPNGLIFIDNTGAKKILSAEPITIFESQSAS EECCCCCCEEEEEEEEECCCHHHCCHHHCCCCCEEEEECCCCCCEECCCCEEEEECCCCC EMIVPIEWAEDQGILVEVDVAEAYVDESYETTIEWTLTDAP CEEEEEEECCCCCEEEEEEHHHHHHCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA