| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223181
Identifier: 226223181
GI number: 226223181
Start: 593970
End: 595001
Strand: Direct
Name: 226223181
Synonym: Lm4b_00578
Alternate gene names: NA
Gene position: 593970-595001 (Clockwise)
Preceding gene: 226223180
Following gene: 226223183
Centisome position: 20.39
GC content: 36.34
Gene sequence:
>1032_bases TTGAAAAAAATATGCGCTATCATCTTTGCTTGTGTACTAGCTATTCTTTGTTTTCCAGGACAGCAGGCGTACGCAACAGA AAATAGTAGTTTTTCCGTAAAAGCAATTCTCCCTGACAATCAGGCATCTAGTGTGACCTATTTCGATTTACAAATGAAAC CAAAGCAAAAACAAAGTTTAAATGTAGAAATTACGAACCAGAGTAAAGAAGAAATCACCGTTAATTGCGTTGCCAATACA GCCGTTACCAATGAGATGGGCTACGTGGATTATTCCATACCAAATACGAAACCAGATAAAACGTTAAAATACCCCTTTGC AGATATGGTGAAGGAAAGTGTCTCTGAGGTTACACTTAAGCCAAACGAAACCAAAATTTGGACAGCGGCTATTCAAATGC CCGCTGAAAACTACGACGGTATTATTTTAGGAGGATTACATTTTCAAGAAAAGAAAGAGGAGGATAAAGAAAAAGACTCC AGCGAAAACGATGTCCAAATTAAAAATGAATACGCCTACGTCATTGGTGTCAAATTAACCGAAAAAACGACCGTCGTAAA GCCAGAATTAGAATTAAATCAAATTAAACCAGCGACCAGAAATTACCGAAATGTAGTAGAAATGAATTTGCAAAATACAA AAGCGACCTTAGTTGGTGGACTGGCCGTGGATGCAAAAATATATAAGAAAGGCAGCGAAAAAGTTTTACATGAATCAAAA CGCACAGATTTATCCATGGCGCCAAATTCCAATTTTAATTATAGTGTAGATTGGGAAAATCAAGAGTTAAAACCAGGTAA ATATAAAGTGCATTTAGTTGCTAAGAACAAAGAAGATAAATGGGAGTGGACAAAAGAATTCACTATCTCTTCTGATCAAG CAAAAAAAGCCAATAAAGTAGCTCTTGGACTGGAGAAAGACTACACGTGGATGTATATCGTAGGTGGAGTATTGCTTTTC ATTCTTCTTATTATCGCAACTTACTTTGTTGGCAAACGAGCAGCAAAGAAAAAACAGGAAAATGAAAAATAG
Upstream 100 bases:
>100_bases TTTAAGCGATACACCAGCAGTTTAACATTTTTAAGAGAAAACTTCATTTTTGGATGTTGTTTTCTCTTTTTACATTGAGC AATTAGGAGGAAAGAGACAC
Downstream 100 bases:
>100_bases CCTAACGAAAAAACAGCTTGAAAATGAGAATTTACCTCGTTTTCAAGCTGTTTTTATTATTTTTCGATTTTTTCTGTTTC TACGACACGAAGTCCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: C-Terminal Membrane Anchored Cell Surface Protein; Cell Wall Surface Anchor Family Protein; Secreted Protein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKKICAIIFACVLAILCFPGQQAYATENSSFSVKAILPDNQASSVTYFDLQMKPKQKQSLNVEITNQSKEEITVNCVANT AVTNEMGYVDYSIPNTKPDKTLKYPFADMVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKDS SENDVQIKNEYAYVIGVKLTEKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLVGGLAVDAKIYKKGSEKVLHESK RTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKNKEDKWEWTKEFTISSDQAKKANKVALGLEKDYTWMYIVGGVLLF ILLIIATYFVGKRAAKKKQENEK
Sequences:
>Translated_343_residues MKKICAIIFACVLAILCFPGQQAYATENSSFSVKAILPDNQASSVTYFDLQMKPKQKQSLNVEITNQSKEEITVNCVANT AVTNEMGYVDYSIPNTKPDKTLKYPFADMVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKDS SENDVQIKNEYAYVIGVKLTEKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLVGGLAVDAKIYKKGSEKVLHESK RTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKNKEDKWEWTKEFTISSDQAKKANKVALGLEKDYTWMYIVGGVLLF ILLIIATYFVGKRAAKKKQENEK >Mature_343_residues MKKICAIIFACVLAILCFPGQQAYATENSSFSVKAILPDNQASSVTYFDLQMKPKQKQSLNVEITNQSKEEITVNCVANT AVTNEMGYVDYSIPNTKPDKTLKYPFADMVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKDS SENDVQIKNEYAYVIGVKLTEKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLVGGLAVDAKIYKKGSEKVLHESK RTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKNKEDKWEWTKEFTISSDQAKKANKVALGLEKDYTWMYIVGGVLLF ILLIIATYFVGKRAAKKKQENEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38810; Mature: 38810
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKICAIIFACVLAILCFPGQQAYATENSSFSVKAILPDNQASSVTYFDLQMKPKQKQSL CHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCE NVEITNQSKEEITVNCVANTAVTNEMGYVDYSIPNTKPDKTLKYPFADMVKESVSEVTLK EEEEECCCCCEEEEEEEECCEEECCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHEEEC PNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKDSSENDVQIKNEYAYVIGVKLT CCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEE EKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLVGGLAVDAKIYKKGSEKVLHESK CCEEEECCCCCHHHCCCCHHHHHHEEEEECCCCEEEEEECEEECHHHHHCCCHHHHHHHH RTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKNKEDKWEWTKEFTISSDQAKKANKV CCCEEECCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCHHHCCCEE ALGLEKDYTWMYIVGGVLLFILLIIATYFVGKRAAKKKQENEK EEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKICAIIFACVLAILCFPGQQAYATENSSFSVKAILPDNQASSVTYFDLQMKPKQKQSL CHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCE NVEITNQSKEEITVNCVANTAVTNEMGYVDYSIPNTKPDKTLKYPFADMVKESVSEVTLK EEEEECCCCCEEEEEEEECCEEECCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHEEEC PNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKDSSENDVQIKNEYAYVIGVKLT CCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEE EKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLVGGLAVDAKIYKKGSEKVLHESK CCEEEECCCCCHHHCCCCHHHHHHEEEEECCCCEEEEEECEEECHHHHHCCCHHHHHHHH RTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKNKEDKWEWTKEFTISSDQAKKANKV CCCEEECCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCHHHCCCEE ALGLEKDYTWMYIVGGVLLFILLIIATYFVGKRAAKKKQENEK EEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA