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The map label for this gene is hyuC [H]

Identifier: 226223166

GI number: 226223166

Start: 578806

End: 580077

Strand: Direct

Name: hyuC [H]

Synonym: Lm4b_00563

Alternate gene names: 226223166

Gene position: 578806-580077 (Clockwise)

Preceding gene: 226223165

Following gene: 226223167

Centisome position: 19.87

GC content: 41.67

Gene sequence:

>1272_bases
ATGCAAACAAATCTTGAAAGAATAAAAAAACACATAGAAAAATTAGATACTTATACAGCAACTCCGGGTCAGGGAACAAC
TCGGTTTACATATAGCAAAGAAGACCTCGACGCGCGCAACTATTTAAAACAAGAAATGGCTAAAGTAGGCCTTGCTGTTT
CAGAAGATGCGATTGGAAATATCTACGGACGACTAGAAGGCGAAAATCCAAATTTACCAGCAGTAATTGTCGGCTCTCAT
TTTGACTCTGTACCAAATGGTGGTGCTTTTGATGGACCAGCTGGCGTCATTACCGGACTTGAAGTAGCCACTGTTTTCTA
TGAACAACAAATTAAACCACATTTTCCGCTTGAAATTATTGCGATGGTGGAAGAAGAAGGCGCTCGTTTTGGCGCTGGCC
TCCTTGCTTCACGTACAATTACTGGCAAAGTTACCAAAGAAATGCTCCATGAAATGAAAGATATAGATGGAATTACAGCC
GCAGAAGCCATGGCAAAAGTAGGATTTGATGCAAATCAAGTAGTTACAGCTATCCGCACGAAAGAATCCGTTAAAGCATT
TATCGAACTACACATTGAGCAAGGACCAGTCCTAGAAAATGCCAATGAAGATGTGGCGCTAGTAGATACAGTAGTCGGTT
TAACAGAAATAAAAGTAACAGTAAAAGGACAAGCCGGCCATGCAGGCACAACCCCAATGCTTGACCGAAAAGATGCGCTG
ATCACAGCTGTCGAAATTTTAGGTCAACTACCAGAACTAGCTATCCAAGAAGGCGGCGGAACTGTATTAACAGTGGGCAA
ACTCAACGTCTATCCAAATGGCGCAAACGTTATTCCAGATAAAGTCGTTTTTACCGTAGATATCCGAGCAAAAGACGAAA
TTCACGTCCAAAATACATTAGCAAAAACAAAAGAAATTATCCAATCCGCAGAGAAAAACGGCATCACTTGCGAAATAGAA
GATATGCTATACGAACCGCCGACCCATTTATCAAAAGAGATTCATCAAGCATTGACTGAAAGTGCCGACCAACTCGGCTT
AAAATACCGAACAATGGTTAGCGGGGCGGGACACGATGCAATGATTTTTGCAGGTTTAACCGAAGTAGGCTTGATTTTTG
TCCCTAGCCACAATGGTATAAGCCATGCGCCCGAAGAATGGACGGATTACGACAAACTCCAAAAAGGAATCGAAGTCGTA
CTGGAAACAGTAAAAAAATGGACGGAGGAAAGCGCGAATGAATCAGAAAATAAAACAAGCAGTTTTAAATAA

Upstream 100 bases:

>100_bases
GCAAGTGATCCCTAGAAAATAGGGATCACTTTTTTTGTGAGTTGTTTTAGCGAGCATTTTTTCAAGTTTCCTGTAAAATA
GAAAAAAGGAGGTGTGCTTG

Downstream 100 bases:

>100_bases
TGAAGAAGCAATGATTGCCTTCCGCCGTGATTTGCACATGCATCCCGAACTCCAATGGCAGGAATTTAGAACTACCGACA
AAGTTGCCAAAGAATTGGAC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQTNLERIKKHIEKLDTYTATPGQGTTRFTYSKEDLDARNYLKQEMAKVGLAVSEDAIGNIYGRLEGENPNLPAVIVGSH
FDSVPNGGAFDGPAGVITGLEVATVFYEQQIKPHFPLEIIAMVEEEGARFGAGLLASRTITGKVTKEMLHEMKDIDGITA
AEAMAKVGFDANQVVTAIRTKESVKAFIELHIEQGPVLENANEDVALVDTVVGLTEIKVTVKGQAGHAGTTPMLDRKDAL
ITAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVVFTVDIRAKDEIHVQNTLAKTKEIIQSAEKNGITCEIE
DMLYEPPTHLSKEIHQALTESADQLGLKYRTMVSGAGHDAMIFAGLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVV
LETVKKWTEESANESENKTSSFK

Sequences:

>Translated_423_residues
MQTNLERIKKHIEKLDTYTATPGQGTTRFTYSKEDLDARNYLKQEMAKVGLAVSEDAIGNIYGRLEGENPNLPAVIVGSH
FDSVPNGGAFDGPAGVITGLEVATVFYEQQIKPHFPLEIIAMVEEEGARFGAGLLASRTITGKVTKEMLHEMKDIDGITA
AEAMAKVGFDANQVVTAIRTKESVKAFIELHIEQGPVLENANEDVALVDTVVGLTEIKVTVKGQAGHAGTTPMLDRKDAL
ITAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVVFTVDIRAKDEIHVQNTLAKTKEIIQSAEKNGITCEIE
DMLYEPPTHLSKEIHQALTESADQLGLKYRTMVSGAGHDAMIFAGLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVV
LETVKKWTEESANESENKTSSFK
>Mature_423_residues
MQTNLERIKKHIEKLDTYTATPGQGTTRFTYSKEDLDARNYLKQEMAKVGLAVSEDAIGNIYGRLEGENPNLPAVIVGSH
FDSVPNGGAFDGPAGVITGLEVATVFYEQQIKPHFPLEIIAMVEEEGARFGAGLLASRTITGKVTKEMLHEMKDIDGITA
AEAMAKVGFDANQVVTAIRTKESVKAFIELHIEQGPVLENANEDVALVDTVVGLTEIKVTVKGQAGHAGTTPMLDRKDAL
ITAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVVFTVDIRAKDEIHVQNTLAKTKEIIQSAEKNGITCEIE
DMLYEPPTHLSKEIHQALTESADQLGLKYRTMVSGAGHDAMIFAGLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVV
LETVKKWTEESANESENKTSSFK

Specific function: Converts N-carbamyl-L-amino acids to L-amino acids [H]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=394, Percent_Identity=36.0406091370558, Blast_Score=246, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 45904; Mature: 45904

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNLERIKKHIEKLDTYTATPGQGTTRFTYSKEDLDARNYLKQEMAKVGLAVSEDAIGN
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHCCCHHHHHHHHHHHHCCCCCCHHHHH
IYGRLEGENPNLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVATVFYEQQIKPHFPLEII
HHEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEE
AMVEEEGARFGAGLLASRTITGKVTKEMLHEMKDIDGITAAEAMAKVGFDANQVVTAIRT
EEEHHCCCHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
KESVKAFIELHIEQGPVLENANEDVALVDTVVGLTEIKVTVKGQAGHAGTTPMLDRKDAL
HHHHHHHHHEEECCCCCCCCCCCCEEHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHH
ITAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVVFTVDIRAKDEIHVQNTL
HHHHHHHHHCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHH
AKTKEIIQSAEKNGITCEIEDMLYEPPTHLSKEIHQALTESADQLGLKYRTMVSGAGHDA
HHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHCCCCCCCE
MIFAGLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLETVKKWTEESANESENKTS
EEEECCCCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SFK
CCC
>Mature Secondary Structure
MQTNLERIKKHIEKLDTYTATPGQGTTRFTYSKEDLDARNYLKQEMAKVGLAVSEDAIGN
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHCCCHHHHHHHHHHHHCCCCCCHHHHH
IYGRLEGENPNLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVATVFYEQQIKPHFPLEII
HHEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEE
AMVEEEGARFGAGLLASRTITGKVTKEMLHEMKDIDGITAAEAMAKVGFDANQVVTAIRT
EEEHHCCCHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
KESVKAFIELHIEQGPVLENANEDVALVDTVVGLTEIKVTVKGQAGHAGTTPMLDRKDAL
HHHHHHHHHEEECCCCCCCCCCCCEEHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHH
ITAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVVFTVDIRAKDEIHVQNTL
HHHHHHHHHCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHH
AKTKEIIQSAEKNGITCEIEDMLYEPPTHLSKEIHQALTESADQLGLKYRTMVSGAGHDA
HHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHCCCCCCCE
MIFAGLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLETVKKWTEESANESENKTS
EEEECCCCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SFK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1732229 [H]