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The map label for this gene is nagC [C]

Identifier: 226223145

GI number: 226223145

Start: 551341

End: 552345

Strand: Direct

Name: nagC [C]

Synonym: Lm4b_00542

Alternate gene names: 226223145

Gene position: 551341-552345 (Clockwise)

Preceding gene: 226223144

Following gene: 226223146

Centisome position: 18.93

GC content: 41.89

Gene sequence:

>1005_bases
ATGGCAATTCCTCGTGATTTAAAAGAATTGAATAAGAAAAATATCAAGTCGATTTTACGGCAACAAGGTGCGATGACGAA
AGCGGAAATCGCCGAAGTGACTGGTCTTAGTGTAGTTACAGTGAACAAGCTGATTCGTGATTTAGTGGAAAATGAAGAGA
TTTTAGAACAAGATAATTCGGTTGCGACTGGCGGAAGAAGAGCTGTTTCGTATGAAATTAATCCTAATTTTCAGCAAGTG
TTGGTTATTAGTTTGCAAGAAAAGTGGAAGAAAATTACTTATTCTTTTTCGGTCTATAATTTGCTTGGTGAGCCGGAGTT
TGTGGAGGATATGTCTGGGGAGGATTTGGACATTACTGCGCTGAAACGGAATACGAAAGATCTTGTTTGCGCTTTTCCGA
AGATTTCTTGTGTTGTAATCGGGGTACCGGGGATTGAGATTGGAGGTAAGTTGCGGGCGATGGACTTTCCGCTACTTTTA
AATGTGCAATTGCGGGAGACTTTGGAGGCGGAAGTGAATTTGCCGGTGTTGGTTGAGACGGATACGAATGCGGCAATTTT
AGGGTATAAAAATCGACCAATGAAAGAGGAGAATATCGTTGGACTTTATTATCCGGAGCGTTTTCCACCGGGTGCAGGGC
TTTTGATGAACGGAGAGATTTTGAAAGGTCAGAACGGACTGGCTGGGGAGATTAAGCATATGCCGCTTCAAGTGGACTGG
GATAACTTTGACTTTTCGGTCGATGAAATTAAAGCACACATTCGTAAAATGGTGCTGCTAACGATGAGTTTTTATGATCC
GGAAACGATTGTGCTCTATACAAATTTTTATTTTGGGCAGAAGGATTTCACCGAGGAACTGACGGAAGAGTTAAAGCAAG
TTTATCCATATGCGGTTTTGCCGGAGATTGTGTTGTCGCGTAAGTTTACGACGGATTATCGGATTGGGCTTTTGGCGTTT
GGGATTGATTATTTGGAGAATAATATGACGGATTGGCGGATATAA

Upstream 100 bases:

>100_bases
GTTCTTTTTTGTTTTGACAAATGGGTTCTGAGTGGTTAAAATGATAGTAAATATAGTTTATAAAGTTTGTTTAATAACTT
TACGAATGGAGTGGTTGATG

Downstream 100 bases:

>100_bases
CTTTGGAAAGAAAATGCTCTAGATTTTTAGAGCATTTTCTTTATTATTCAACAAAAAATTTTAAGTCTATGAAGAAAAGA
GTAATAAAATATAGTTAAGT

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Rok Family Protein; Transcriptional Regulator/Sugar Kinase; Rok Family Transcriptional Repressor

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKLIRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQV
LVISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITALKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLL
NVQLRETLEAEVNLPVLVETDTNAAILGYKNRPMKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDW
DNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDFTEELTEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAF
GIDYLENNMTDWRI

Sequences:

>Translated_334_residues
MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKLIRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQV
LVISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITALKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLL
NVQLRETLEAEVNLPVLVETDTNAAILGYKNRPMKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDW
DNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDFTEELTEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAF
GIDYLENNMTDWRI
>Mature_333_residues
AIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKLIRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQVL
VISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITALKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLLN
VQLRETLEAEVNLPVLVETDTNAAILGYKNRPMKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDWD
NFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDFTEELTEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAFG
IDYLENNMTDWRI

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786891, Length=242, Percent_Identity=24.7933884297521, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37970; Mature: 37839

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKLIRDLVENEEILEQDNS
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCC
VATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITA
CCCCCCEEEEEEECCCHHHEEEEEHHHHHHHEEEEEEEEECCCCCHHHHHCCCCCEEEEE
LKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLLNVQLRETLEAEVNLPVLVET
ECCCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEEHHHHHHHHCCCCCEEEEC
DTNAAILGYKNRPMKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDW
CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEECCCCCCCCEEECCEEEEC
DNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDFTEELTEELKQVYPYAVL
CCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHH
PEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKLIRDLVENEEILEQDNS
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCC
VATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITA
CCCCCCEEEEEEECCCHHHEEEEEHHHHHHHEEEEEEEEECCCCCHHHHHCCCCCEEEEE
LKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLLNVQLRETLEAEVNLPVLVET
ECCCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEEHHHHHHHHCCCCCEEEEC
DTNAAILGYKNRPMKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDW
CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEECCCCCCCCEEECCEEEEC
DNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDFTEELTEELKQVYPYAVL
CCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHH
PEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA