| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is isdG
Identifier: 226223107
GI number: 226223107
Start: 516635
End: 517000
Strand: Direct
Name: isdG
Synonym: Lm4b_00504
Alternate gene names: 226223107
Gene position: 516635-517000 (Clockwise)
Preceding gene: 226223106
Following gene: 226223108
Centisome position: 17.74
GC content: 42.9
Gene sequence:
>366_bases ATGATTATTGTAACTAATACGATTAAGGTAGAAAAAGGCGCAGCAGAGCACGTTATCCGTCAGTTCACAGGCGCAAATGG CGACGGACATCCAACAAAAGATATCGCAGAAGTAGAAGGTTTCCTAGGCTTCGAACTATGGCACAGCAAACCAGAAGACA AAGACTATGAAGAAGTAGTCGTAACAAGCAAATGGGAAAGTGAAGAAGCCCAACGCAATTGGGTGAAAAGCGATTCCTTC AAAAAAGCACACGGCAGAACAAAAGACACTAGAGAACAAAGAGAAGACCGCAAAGGCATCGTAGGAAATGCAATCGCTCG TTTTGAAGTGGTTCACGTGCAAAACCCTGTGATTGTTGAAAAATAA
Upstream 100 bases:
>100_bases AAGCCCATTCCCTAAAATTGACATTGAGAATCATTATCAATATAATGGAAGGAACTAGCCTATTATACATACAATACAAT TATCCAAGGGGGATTTAAGA
Downstream 100 bases:
>100_bases GAAGTGAATGAACAAGCCGTTTCGAGGTAGATGGCTTGTTTTTTTGCGCGCTCGAATTTTCAGATAATTATTGAATTTTT ATATCTTATGCGGTATATTA
Product: heme-degrading monooxygenase IsdG
Products: NA
Alternate protein names: Heme oxygenase; Iron-regulated surface determinant isdG; Iron-responsive surface determinant isdG
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSF KKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVEK
Sequences:
>Translated_121_residues MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSF KKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVEK >Mature_121_residues MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSF KKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVEK
Specific function: Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subseque
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antibiotic biosynthesis monooxygenase family. Heme-degrading monooxygenase isdG subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISDG_LISIN (Q7AP29)
Other databases:
- EMBL: AL596165 - RefSeq: NP_469830.1 - ProteinModelPortal: Q7AP29 - GeneID: 1128937 - GenomeReviews: AL592022_GR - KEGG: lin:lin0487 - GenoList: LIN0487 - HOGENOM: HBG112566 - OMA: WTKSSAF - ProtClustDB: PRK13316 - BioCyc: LINN272626:LIN0487-MONOMER - BRENDA: 1.14.99.3 - GO: GO:0005737 - HAMAP: MF_01272 - InterPro: IPR007138 - InterPro: IPR011008
Pfam domain/function: PF03992 ABM; SSF54909 Dimer_A_B_barrel
EC number: =1.14.99.3
Molecular weight: Translated: 13786; Mature: 13786
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVV CEEECCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEE VTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVE EECCCCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCCCHHHHEEEEECCCCEEEC K C >Mature Secondary Structure MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVV CEEECCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEE VTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVE EECCCCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCCCHHHHEEEEECCCCEEEC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669