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The map label for this gene is metQ [H]

Identifier: 226222921

GI number: 226222921

Start: 316086

End: 316907

Strand: Reverse

Name: metQ [H]

Synonym: Lm4b_00313

Alternate gene names: 226222921

Gene position: 316907-316086 (Counterclockwise)

Preceding gene: 226222930

Following gene: 226222920

Centisome position: 10.88

GC content: 35.64

Gene sequence:

>822_bases
ATGAGAAAATTAACAAAAGGGTTAGGAATTTTACTTGCATCAAGTCTTGTTTTAGGATTAGCAGCATGTGGAGGAGGCAG
TGACGACAAAGCCTTAAGCACAGAAAAAATTACAATTGGAACAACAGCAGGACCTCACCAACAAATCGCTGAAGAAGTTC
AAAAATTAGCGAAAAAAGACGGTCTTGAAATCAAAATCAAAACATTTGATGATTATAACACGCCAAATACAGCTTTAAAT
GATGGTGATTTGGATGCGAATAACTACCAAACAATTCCATTTTTAGAGCAACAAAAGAAAGATAAAGGCTACAAATTAGA
CGTTGCTTTTAAAACAGTAGCATTCCCAATGGGCATTTACTCCAACGATATTAAAGACTTGAAAAATCTTAAAAAAGGCG
ACAAAATTGCCGTTCCAAATGATCCAAGTAACGAATACCGTGGTTTAAAACTGTTTGAAGATGCTGGCGTTATTAAATTA
AAAGATGGTGTGGAAGAAAAAGCAACGAAAAAAGACATTGCTGAAAACCCGCTTGACCTTGAAATCGTTGAACTTGAAGC
TTCTCAAATACCTGCACAATTAGATGAAGTTGCAGCCGCAGCTATCAATACTAACTTTGCAATGGGCGCTGGACTTTCTA
TTAATAAAGATGCCATTTACCACGAACCTACAAAAGACAATCCATATCCAAACGTTTTCGTTGTTCGTAGTGCCAACAAA
GACGATGAAGTCGTAAAAACATTAGAAAAATATTACCATTCAGATGAAGTAAAAGCATTTATTGAAAAAGAATTTAATGG
GTCTGTAGTACCTGCATTCTAG

Upstream 100 bases:

>100_bases
TATGTTCGACTTTCCACTTCTCTATTCTAAATAGAGAAGTTTTTTATTGTTTTCATGAATAAATCTGGATAATCACACAA
CATACTAGGGAGGAAAAAAG

Downstream 100 bases:

>100_bases
GGAGTTGTTTTATTTTGATCGAATTACATCAAGTTTCAAAATCATTTAACGTAAATGGAAAAACCGTAGAAGCCGTCAAA
AATGTTTCTATTACAGTAGA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALN
DGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKL
KDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANK
DDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF

Sequences:

>Translated_273_residues
MRKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALN
DGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKL
KDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANK
DDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF
>Mature_273_residues
MRKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALN
DGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKL
KDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANK
DDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=262, Percent_Identity=46.5648854961832, Blast_Score=210, Evalue=9e-56,
Organism=Escherichia coli, GI1790093, Length=250, Percent_Identity=40, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29839; Mature: 29839

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAKKD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
GLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIY
CCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCEEEEEEEEHHHHCCCC
SNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEEKATKKDIAENPLDL
HHHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHCCCCCE
EIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANK
EEEEECHHHCCHHHHHHHHHHHCCCEEECCCCEECCCCEEECCCCCCCCCCEEEEECCCC
DDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF
CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAKKD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
GLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIY
CCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCEEEEEEEEHHHHCCCC
SNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEEKATKKDIAENPLDL
HHHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHCCCCCE
EIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANK
EEEEECHHHCCHHHHHHHHHHHCCCEEECCCCEECCCCEEECCCCCCCCCCEEEEECCCC
DDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF
CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]