| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is actA
Identifier: 226222833
GI number: 226222833
Start: 206164
End: 207978
Strand: Direct
Name: actA
Synonym: Lm4b_00202
Alternate gene names: 226222833
Gene position: 206164-207978 (Clockwise)
Preceding gene: 226222832
Following gene: 226222834
Centisome position: 7.08
GC content: 40.11
Gene sequence:
>1815_bases GTGGGATTAAATAGATTTATGCGTGCGATGATGGTAGTTTTCATTACCGCCAACTGCATTACGATTAACCCCGACATAAT ATTTGCAGCGACAGATAGCGAAGATTCCAGTCTGAACACAGATGAATGGGAAGAAGAAAAAACAGAAGAGCAGCCAAGCG AGGTAAATACGGGACCAAGATACGAAACTGCACGTGAAGTAAGTTCACGTGATATTGAGGAACTAGAAAAATCGAATAAA GTGAAAAATACGAACAAAGCAGACCTAATAGCAATGTTGAAAGCAAAAGCAGAAAAAGGTCCAAATATTAATAATAACAA CAGTGAACAAAGCGAGAATGTGGCTATAAATGAAGAAGCTTCAGGATCCGACCGACCAGCTATACAAGTGGAGCGTCGTC ATCCAGGGTTGCCATCGGATAGCGCCGCGGAAATTAAAAAAAGAAGGAAAGCTATAGCATCATCGGATAGTGAGCTTGAA AGCCTTACTTATCCGGATAAACCAACAAAAGCAACTAAGAAAAAAGTGGCGAAAGCGTCAGTTACGGATACTTCTGAAAG TGACTTAGATTCTAGCATGCAGTCAGCGGATGAGTCTACACCACAACCTTTAAAAGCAAATCAACAACCATTTTTCCCTA AAGTATTTAAAAAAATAAAAGATGCGGGTAAATGGGTACGTGATAAAATCGACGAAAATCCCGAAGTGAAGAAAGCAATT GTTGATAAAAGTGCAGGGTTAATTGACCAATTATTAACTAAGAAGAAAAATGAAGAGGTAAATGCTTCGGACTTTCCACC ACCGCCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGACACCGATGCTTCTTGGTTTTAATGCTCCTGCTACATCGG AACCGAGCTCATTCGAATTTCCACCGCCTCCAACAGAAGATGAACTAGAAATTATGCGGGAAACAGCACCTTCGCTAGAT TCTAGTTTTACAAGCGGGGATTTAGCTAGTTTGAGAAGTGCTATTAATCGCCATAGCCAAAATTTCTCTGATTTTCCACC AATGCCAACAGAAGAAGAGTTGAACGGGAGAGGTGGTATACCAACATCTGAAGAATTTAGTTCGCTGAATAGTGGCGATT TTACAGATGACGAAAACAGCGAGACAACAGAAGAAGAAATTGATCGCCTAGCTGATTTAAGAGATAGAGGAACAGGAAAA CACTCAAGAAATGCGGGTTTTTTACCATTAAATCCGTTTACTAGCAGCCCGGTTCCTTCGTTAAGTCCAAAGGTATCGAA AATAAGCGCGCCGGCTCTGATAACTGACGTAACTAAAAAAGCACCATTTAAAAATCCGCCACAGCCATTAAATGTGTTTA ACAAAAAAACTACAACGAAAACAGCACCAAAAAAAATAACCCCTGTGAATACCGCGCCAAAGCTAGCAGCACTTCCTATC ACGAAAGCGCAAGAAACTGAGCTTGGGGAAAATAAAGCACCATTTATAGAAAAACAAGCAGAGACAAACAATCGGCCAAT TGATATGCCGAGCCTACCAGTAATCCAAAAAGAAGTTACAGAAAGAAATAAAGAGGAAATGAAACCGCAAACCGAGGAAA AAGTGGTAGGAGAAAGCGAACCAGCTAATAATGTGAACGGAAAAAAACGTTCTGCTGGCATTGAAGAAGGAAAATTAATT GCTAAAAGTGCAGAAGACGAAAAAGCAAAAGAAGAACCAGTGAACCATACGACGTTAATTCTTGCCATGTTAGCTATTGG CGTGTTCTCTTTAGGAGCGGTTATCAAAATCATTCAATTAAGAAAAAATAGTTGA
Upstream 100 bases:
>100_bases TGCTAATCCAATTTTTAACGGAATAAATTAGTGAAAATGAAGGCCAGATTTTCCTTGTTCTAAAAAGGTTGTATTAGCGT ATCACGAGGAGGGAGTATAA
Downstream 100 bases:
>100_bases AGACGCAGAATGAAAGAAAAAGTGAGGTGAGTGATGTGAAGTTCAAAAAAGTGGTTCTAGGTATGTGCTTGACCGCAAGT GTTCTAGTCTTTCCTGTAAC
Product: actin-assembly inducing protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 603
Protein sequence:
>604_residues MGLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWEEEKTEEQPSEVNTGPRYETAREVSSRDIEELEKSNK VKNTNKADLIAMLKAKAEKGPNINNNNSEQSENVAINEEASGSDRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELE SLTYPDKPTKATKKKVAKASVTDTSESDLDSSMQSADESTPQPLKANQQPFFPKVFKKIKDAGKWVRDKIDENPEVKKAI VDKSAGLIDQLLTKKKNEEVNASDFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFEFPPPPTEDELEIMRETAPSLD SSFTSGDLASLRSAINRHSQNFSDFPPMPTEEELNGRGGIPTSEEFSSLNSGDFTDDENSETTEEEIDRLADLRDRGTGK HSRNAGFLPLNPFTSSPVPSLSPKVSKISAPALITDVTKKAPFKNPPQPLNVFNKKTTTKTAPKKITPVNTAPKLAALPI TKAQETELGENKAPFIEKQAETNNRPIDMPSLPVIQKEVTERNKEEMKPQTEEKVVGESEPANNVNGKKRSAGIEEGKLI AKSAEDEKAKEEPVNHTTLILAMLAIGVFSLGAVIKIIQLRKNS
Sequences:
>Translated_604_residues MGLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWEEEKTEEQPSEVNTGPRYETAREVSSRDIEELEKSNK VKNTNKADLIAMLKAKAEKGPNINNNNSEQSENVAINEEASGSDRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELE SLTYPDKPTKATKKKVAKASVTDTSESDLDSSMQSADESTPQPLKANQQPFFPKVFKKIKDAGKWVRDKIDENPEVKKAI VDKSAGLIDQLLTKKKNEEVNASDFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFEFPPPPTEDELEIMRETAPSLD SSFTSGDLASLRSAINRHSQNFSDFPPMPTEEELNGRGGIPTSEEFSSLNSGDFTDDENSETTEEEIDRLADLRDRGTGK HSRNAGFLPLNPFTSSPVPSLSPKVSKISAPALITDVTKKAPFKNPPQPLNVFNKKTTTKTAPKKITPVNTAPKLAALPI TKAQETELGENKAPFIEKQAETNNRPIDMPSLPVIQKEVTERNKEEMKPQTEEKVVGESEPANNVNGKKRSAGIEEGKLI AKSAEDEKAKEEPVNHTTLILAMLAIGVFSLGAVIKIIQLRKNS >Mature_603_residues GLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWEEEKTEEQPSEVNTGPRYETAREVSSRDIEELEKSNKV KNTNKADLIAMLKAKAEKGPNINNNNSEQSENVAINEEASGSDRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELES LTYPDKPTKATKKKVAKASVTDTSESDLDSSMQSADESTPQPLKANQQPFFPKVFKKIKDAGKWVRDKIDENPEVKKAIV DKSAGLIDQLLTKKKNEEVNASDFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFEFPPPPTEDELEIMRETAPSLDS SFTSGDLASLRSAINRHSQNFSDFPPMPTEEELNGRGGIPTSEEFSSLNSGDFTDDENSETTEEEIDRLADLRDRGTGKH SRNAGFLPLNPFTSSPVPSLSPKVSKISAPALITDVTKKAPFKNPPQPLNVFNKKTTTKTAPKKITPVNTAPKLAALPIT KAQETELGENKAPFIEKQAETNNRPIDMPSLPVIQKEVTERNKEEMKPQTEEKVVGESEPANNVNGKKRSAGIEEGKLIA KSAEDEKAKEEPVNHTTLILAMLAIGVFSLGAVIKIIQLRKNS
Specific function: Virulence factor required for host cell microfilament interaction. It induces actin assembly around the bacteria to allow it to move within the cytoplasm. It is involved in the actin polymerization process. It seems to act as a nucleator that induces the
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007752 [H]
Pfam domain/function: PF05058 ActA [H]
EC number: NA
Molecular weight: Translated: 66297; Mature: 66166
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWEEEKTEEQPSEVNTGPR CCHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC YETAREVSSRDIEELEKSNKVKNTNKADLIAMLKAKAEKGPNINNNNSEQSENVAINEEA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCC SGSDRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELESLTYPDKPTKATKKKVAKAS CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH VTDTSESDLDSSMQSADESTPQPLKANQQPFFPKVFKKIKDAGKWVRDKIDENPEVKKAI CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VDKSAGLIDQLLTKKKNEEVNASDFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFEF HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC PPPPTEDELEIMRETAPSLDSSFTSGDLASLRSAINRHSQNFSDFPPMPTEEELNGRGGI CCCCCHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC PTSEEFSSLNSGDFTDDENSETTEEEIDRLADLRDRGTGKHSRNAGFLPLNPFTSSPVPS CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCC LSPKVSKISAPALITDVTKKAPFKNPPQPLNVFNKKTTTKTAPKKITPVNTAPKLAALPI CCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCC TKAQETELGENKAPFIEKQAETNNRPIDMPSLPVIQKEVTERNKEEMKPQTEEKVVGESE CCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCC PANNVNGKKRSAGIEEGKLIAKSAEDEKAKEEPVNHTTLILAMLAIGVFSLGAVIKIIQL CCCCCCCCHHHCCCCCCCEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RKNS HCCC >Mature Secondary Structure GLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWEEEKTEEQPSEVNTGPR CHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC YETAREVSSRDIEELEKSNKVKNTNKADLIAMLKAKAEKGPNINNNNSEQSENVAINEEA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCC SGSDRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELESLTYPDKPTKATKKKVAKAS CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH VTDTSESDLDSSMQSADESTPQPLKANQQPFFPKVFKKIKDAGKWVRDKIDENPEVKKAI CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VDKSAGLIDQLLTKKKNEEVNASDFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFEF HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC PPPPTEDELEIMRETAPSLDSSFTSGDLASLRSAINRHSQNFSDFPPMPTEEELNGRGGI CCCCCHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC PTSEEFSSLNSGDFTDDENSETTEEEIDRLADLRDRGTGKHSRNAGFLPLNPFTSSPVPS CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCC LSPKVSKISAPALITDVTKKAPFKNPPQPLNVFNKKTTTKTAPKKITPVNTAPKLAALPI CCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCC TKAQETELGENKAPFIEKQAETNNRPIDMPSLPVIQKEVTERNKEEMKPQTEEKVVGESE CCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCC PANNVNGKKRSAGIEEGKLIAKSAEDEKAKEEPVNHTTLILAMLAIGVFSLGAVIKIIQL CCCCCCCCHHHCCCCCCCEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RKNS HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1309513; 1739966; 1582425; 11679669; 8112291 [H]