Click here to switch to the map view.

The map label for this gene is ydjC [C]

Identifier: 226222820

GI number: 226222820

Start: 191580

End: 192317

Strand: Direct

Name: ydjC [C]

Synonym: Lm4b_00188

Alternate gene names: 226222820

Gene position: 191580-192317 (Clockwise)

Preceding gene: 226222819

Following gene: 226222821

Centisome position: 6.58

GC content: 39.84

Gene sequence:

>738_bases
ATGAAAATTATTTTTAATGCAGATGATTTTGGAATTAGCCCGGGAGCAGTTTATGGTATTTTAGAGTCTTATAAGCGAGG
CGTTGTGAAATCTACCACGCTTCTTGCTAATAGCCCGGCATTTGATTTGGCAGTTGAAGTTGCGAAAGAAAACCCAGGTC
TCGATATTGGTGCGCATTTGACCCTGACGTTCGGTTCTCCAGTCCTTCAAGGTTTAGAAACGCTAACGGATGATGATGGG
CGTTTCCGCAGAAATTATACCTCACTTGAAAACGGCTTAGCTGATGTAGATATGAATGAGGTGGAGCGCGAGTTAACTGC
ACAAATCGAGAAAATTTTAGATGCAGGAATCACTATTTCTCATTTTGATACACATCATTCAATTGAGCCGCTAATTTATC
CCGTACAACATAAACTTGCGGAAAAATACGGTGTGAGCATTCGACGTCATTCTGATGTTTCGGACTTCGGTGCTATAAAA
ACTCCTGACTTATTCGCTACGGAGTTTTATGCAGACGGTGTATCTTTTGAAACGATTAAAAAATTAGTACAAAAGCATAT
CGGAACGAATGATGTAGTCGAAGTGATGACTCATCCGGCATTTATTGATGAAACGTTGCGCGAAATATCTAGTTACGTAG
AGCCGCGCATCAAAGAAGTTTCAATTCTAACTTCAAGAGAACTACAAGCATATTTAGGCCAACAAGAAGTAGAGATTATT
AGTTTCCGCGATTTATAA

Upstream 100 bases:

>100_bases
CTTGCGTGGCTTTTGTGAGGAAGTTTATATGGTTAGACCATGGAGTGAAGGCGAGAACGATACAAATATAAATAATTAAT
GAATGAGAGGGGTCAAAGAA

Downstream 100 bases:

>100_bases
GAGCATGGGCCTGTCAAAGGATGTTTATTTGGCAGGCTTTTCGTTAGGTTAAAATAATAAATGTTGTCAATTTTATAGAA
AACGTTTTATAATAGAGAAA

Product: phospho-beta-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLAVEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDG
RFRRNYTSLENGLADVDMNEVERELTAQIEKILDAGITISHFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIK
TPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEII
SFRDL

Sequences:

>Translated_245_residues
MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLAVEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDG
RFRRNYTSLENGLADVDMNEVERELTAQIEKILDAGITISHFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIK
TPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEII
SFRDL
>Mature_245_residues
MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLAVEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDG
RFRRNYTSLENGLADVDMNEVERELTAQIEKILDAGITISHFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIK
TPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEII
SFRDL

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=296, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1788028, Length=250, Percent_Identity=34.8, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 27301; Mature: 27301

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLAVEVAKENPGLDIGAHL
CEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHEEECCCCHHHHHEECCCCCCCEECCEE
TLTFGSPVLQGLETLTDDDGRFRRNYTSLENGLADVDMNEVERELTAQIEKILDAGITIS
EEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
HFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIKTPDLFATEFYADGVSFETIK
ECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHCCCCCCCCHHHHHHHHCCCCHHHHH
KLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEII
HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEE
SFRDL
EECCC
>Mature Secondary Structure
MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLAVEVAKENPGLDIGAHL
CEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHEEECCCCHHHHHEECCCCCCCEECCEE
TLTFGSPVLQGLETLTDDDGRFRRNYTSLENGLADVDMNEVERELTAQIEKILDAGITIS
EEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
HFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIKTPDLFATEFYADGVSFETIK
ECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHCCCCCCCCHHHHHHHHCCCCHHHHH
KLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEII
HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEE
SFRDL
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA