Click here to switch to the map view.

The map label for this gene is wapA [H]

Identifier: 226222793

GI number: 226222793

Start: 157896

End: 159995

Strand: Direct

Name: wapA [H]

Synonym: Lm4b_00159

Alternate gene names: 226222793

Gene position: 157896-159995 (Clockwise)

Preceding gene: 226222792

Following gene: 226222795

Centisome position: 5.42

GC content: 41.05

Gene sequence:

>2100_bases
ATGAGTAAAAACGGAAACTTTTTAAAAAAAGTTGGGTTAGCTTTCTTAAGTATTTTAATCGTCGCTAGCACAATCTTCCA
AACAACAGTTGTGAAAGCGGCAACGAGTTATGGTTCTCAGTTTTTAAACACAGTAGAACTCTTAGACAAAGACGGTGTGC
CGCAAACAGATTTTGGCTACTATGACAATATGGATGTGCACTACACATGGTCTATTCCGAATTCAACAAACGTAAAAGCT
GGAGACACAATGGATTTCACACTGCCAAGCCAATTGGCGCTCGCAACTGATCTCGCTTTTGACGTGAAAGATAGTAATGG
TCAAGTAGTTGGAACGGCCACTGTAAAAAGGGCAACCAATCAAGTTACCCTCGTTTTCAGTGATTATGTAGAAAAACATT
CCGATATTAAAGGAGAACTGGATTTCTGGACCACTTTTAACCAAAAAGTAATTACTGGAAATGAAACAGTTGATTTAGAA
TTTCCTCTTGAAAATGGAACGACGCAAATAGATGTAAAAGTTGGTGAGAAAACCCCAGTTAGCCCGACAGAAACGCTTTT
CAAATATGGTTGGGTGGATGCTAGTAATCCAAGTCTGATTCATTGGGTTATTCGAGTGAACTACGCCAAAGTGAACATTC
CAAATGCCGTTTTCACGGATATCATCGGCTCAAAACAAACATTAAATTTTGATTCTATCAAAGCTTTTCATGGAACTTAT
TCCGCAGATCGGATATTTACAGCAGGCGCGGCTATTTCCAGCACCAATTTTTCCGCAACAAGTGACGGGTTTAGTGTAGC
ACTAGGAGATTTAACGGATTCTGTGCAAATTTCTTATACAACAACCGCAACAGATGGCGGGAAGTCTACCCAGTACGATA
ATACCGCTAAACTAGCCGGAACTGATTTTGTACCCAAGCAAACGTCCACTTGGACACCTGCATCAGGCGGAGGCGGTGAA
GGCGGCGGGACAACCGGTTCAGTAACACTCACGAAAGAAGATGCGAAAACAAAAGCAACCCTCGAAGGTGCGGAATTCAA
GTTGGTGGATTCAAAAGGCACTGTGCTACAAGAAAACATTACAACAAATGCGAGCGGACAACTTAGCATTGCTGATCTGA
AATTTGACACCTACCAATTAATAGAAACAAAAGCCCCGACAGGCTACAAACTTGATACAACACCAGTTGAATTTACTATT
GGTGAAAATAATCAAGCAATTACCGTGACAAAAGAAAATACGCTTAACACAGGCTCCGTGGAACTAACAAAGCTAGACTC
AGCAACCAAAGCAACCCTAGCCGGAGCAACATTCGAATTACAAGATAAAGAAGGAAACACATTACAAACTGGTTTAACTA
CAGATGAAAATGGCGTTCTAAAAGTAACTGATTTAGTACCCGGCAGTTACCAATTTATCGAAACAAGTGCTCCAACAGGC
TACAAGTTAGACAACAGTCCAGTAAGTTTTGAAATCATCGCAAGCGAGACAGATCAAATAGTAAAAGTAACAAAAGAAAA
CACACTAGAAGTTGGCTCCGTGGAACTAACAAAGCTAGACTCAGCAACCAAAGCAACTCTAGCCGGAGCAACATTCGAAT
TACAAAATAAAGAAGGAAACACATTACAAACTGGTTTAACTACGGATGAAAATGGCGTTTTAAACGTAACTGATTTAGTA
CCAGGTACATACCAATTTGTCGAAACAAAAGCCCCAATTGGATATGAACTTGATACGACGCCAGTTGTTTTTGAAATCAT
CGCTGGTGAGACTGACCAGCCGGTAAAAGTAACAAAAGAAAACACATTAGTACCGCCAACACCAGTACCGCCAACACCAG
TACCACCAACACCAGTGCCACCAACACCAATACCGCCTACTCCGTTACCACCAGTACCATACGAACCAACTGTGCCACCA
ACAAAACCAGCAGTACCAGTTACGCCTAAGAAATCAGAAAACAGCGAGGATAGTCCAAAAACGACCCAGATAAGAATAAC
TAAAAGTCTTCCTAAAACAGGAGATACAAATAGTTTTGCTGGCTTAGGAGTAATCCTAATAGCCTTGTCATTAAGTGGTC
TTCTGCTGAAACGAAAATAG

Upstream 100 bases:

>100_bases
TAGGAGCAGTACTTCCGAAAAGTGATATAGCTTGGAGTTACTCAATTGTCATATGATATGTGATAATAACAAAACTTCAT
TAGTAAAGGATGAATTTGTA

Downstream 100 bases:

>100_bases
AAAAAACAGGCTTAGATAATTATCTAAGCCTGTTTTAATTAGGTTGTTTAAGAATTGCAATTGTCACAAAATGTTCACAA
TTAGAAGGCTTTTTTTGTGA

Product: peptidoglycan bound protein (LPXTG motif)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 699; Mature: 698

Protein sequence:

>699_residues
MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKA
GDTMDFTLPSQLALATDLAFDVKDSNGQVVGTATVKRATNQVTLVFSDYVEKHSDIKGELDFWTTFNQKVITGNETVDLE
FPLENGTTQIDVKVGEKTPVSPTETLFKYGWVDASNPSLIHWVIRVNYAKVNIPNAVFTDIIGSKQTLNFDSIKAFHGTY
SADRIFTAGAAISSTNFSATSDGFSVALGDLTDSVQISYTTTATDGGKSTQYDNTAKLAGTDFVPKQTSTWTPASGGGGE
GGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTI
GENNQAITVTKENTLNTGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGSYQFIETSAPTG
YKLDNSPVSFEIIASETDQIVKVTKENTLEVGSVELTKLDSATKATLAGATFELQNKEGNTLQTGLTTDENGVLNVTDLV
PGTYQFVETKAPIGYELDTTPVVFEIIAGETDQPVKVTKENTLVPPTPVPPTPVPPTPVPPTPIPPTPLPPVPYEPTVPP
TKPAVPVTPKKSENSEDSPKTTQIRITKSLPKTGDTNSFAGLGVILIALSLSGLLLKRK

Sequences:

>Translated_699_residues
MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKA
GDTMDFTLPSQLALATDLAFDVKDSNGQVVGTATVKRATNQVTLVFSDYVEKHSDIKGELDFWTTFNQKVITGNETVDLE
FPLENGTTQIDVKVGEKTPVSPTETLFKYGWVDASNPSLIHWVIRVNYAKVNIPNAVFTDIIGSKQTLNFDSIKAFHGTY
SADRIFTAGAAISSTNFSATSDGFSVALGDLTDSVQISYTTTATDGGKSTQYDNTAKLAGTDFVPKQTSTWTPASGGGGE
GGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTI
GENNQAITVTKENTLNTGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGSYQFIETSAPTG
YKLDNSPVSFEIIASETDQIVKVTKENTLEVGSVELTKLDSATKATLAGATFELQNKEGNTLQTGLTTDENGVLNVTDLV
PGTYQFVETKAPIGYELDTTPVVFEIIAGETDQPVKVTKENTLVPPTPVPPTPVPPTPVPPTPIPPTPLPPVPYEPTVPP
TKPAVPVTPKKSENSEDSPKTTQIRITKSLPKTGDTNSFAGLGVILIALSLSGLLLKRK
>Mature_698_residues
SKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAG
DTMDFTLPSQLALATDLAFDVKDSNGQVVGTATVKRATNQVTLVFSDYVEKHSDIKGELDFWTTFNQKVITGNETVDLEF
PLENGTTQIDVKVGEKTPVSPTETLFKYGWVDASNPSLIHWVIRVNYAKVNIPNAVFTDIIGSKQTLNFDSIKAFHGTYS
ADRIFTAGAAISSTNFSATSDGFSVALGDLTDSVQISYTTTATDGGKSTQYDNTAKLAGTDFVPKQTSTWTPASGGGGEG
GGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIG
ENNQAITVTKENTLNTGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGSYQFIETSAPTGY
KLDNSPVSFEIIASETDQIVKVTKENTLEVGSVELTKLDSATKATLAGATFELQNKEGNTLQTGLTTDENGVLNVTDLVP
GTYQFVETKAPIGYELDTTPVVFEIIAGETDQPVKVTKENTLVPPTPVPPTPVPPTPVPPTPIPPTPLPPVPYEPTVPPT
KPAVPVTPKKSENSEDSPKTTQIRITKSLPKTGDTNSFAGLGVILIALSLSGLLLKRK

Specific function: Unknown

COG id: COG4932

COG function: function code M; Predicted outer membrane protein

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR008456
- InterPro:   IPR011252
- InterPro:   IPR019948
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF05737 Collagen_bind; PF00746 Gram_pos_anchor [H]

EC number: NA

Molecular weight: Translated: 74605; Mature: 74474

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSNGQVVGTATVKRATN
CCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHEEEEEEEEEECCCCCEEEEEEHCCCCC
QVTLVFSDYVEKHSDIKGELDFWTTFNQKVITGNETVDLEFPLENGTTQIDVKVGEKTPV
EEEEEEEHHHHHHCCCCCCEEEEEECCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
SPTETLFKYGWVDASNPSLIHWVIRVNYAKVNIPNAVFTDIIGSKQTLNFDSIKAFHGTY
CHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHCCCCEECCHHHEEEECCCC
SADRIFTAGAAISSTNFSATSDGFSVALGDLTDSVQISYTTTATDGGKSTQYDNTAKLAG
CCCEEEECCCEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEECC
TDFVPKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENI
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEEECCCCCEEEECC
TTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGSV
CCCCCCEEEEEEEECCEEEEEEECCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCE
ELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGSYQFIETSAPTG
EEEECCCCCHHEEECEEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCC
YKLDNSPVSFEIIASETDQIVKVTKENTLEVGSVELTKLDSATKATLAGATFELQNKEGN
EEECCCCEEEEEEECCCCEEEEEECCCCEEECCEEEEECCCCHHHEEECEEEEEECCCCC
TLQTGLTTDENGVLNVTDLVPGTYQFVETKAPIGYELDTTPVVFEIIAGETDQPVKVTKE
EEEECCCCCCCCEEEEHCCCCCCEEEEEECCCCCEECCCCCEEEEEECCCCCCCEEEECC
NTLVPPTPVPPTPVPPTPVPPTPIPPTPLPPVPYEPTVPPTKPAVPVTPKKSENSEDSPK
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTQIRITKSLPKTGDTNSFAGLGVILIALSLSGLLLKRK
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure 
SKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSNGQVVGTATVKRATN
CCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHEEEEEEEEEECCCCCEEEEEEHCCCCC
QVTLVFSDYVEKHSDIKGELDFWTTFNQKVITGNETVDLEFPLENGTTQIDVKVGEKTPV
EEEEEEEHHHHHHCCCCCCEEEEEECCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
SPTETLFKYGWVDASNPSLIHWVIRVNYAKVNIPNAVFTDIIGSKQTLNFDSIKAFHGTY
CHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHCCCCEECCHHHEEEECCCC
SADRIFTAGAAISSTNFSATSDGFSVALGDLTDSVQISYTTTATDGGKSTQYDNTAKLAG
CCCEEEECCCEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEECC
TDFVPKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENI
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEEECCCCCEEEECC
TTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGSV
CCCCCCEEEEEEEECCEEEEEEECCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCE
ELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGSYQFIETSAPTG
EEEECCCCCHHEEECEEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCC
YKLDNSPVSFEIIASETDQIVKVTKENTLEVGSVELTKLDSATKATLAGATFELQNKEGN
EEECCCCEEEEEEECCCCEEEEEECCCCEEECCEEEEECCCCHHHEEECEEEEEECCCCC
TLQTGLTTDENGVLNVTDLVPGTYQFVETKAPIGYELDTTPVVFEIIAGETDQPVKVTKE
EEEECCCCCCCCEEEEHCCCCCCEEEEEECCCCCEECCCCCEEEEEECCCCCCCEEEECC
NTLVPPTPVPPTPVPPTPVPPTPIPPTPLPPVPYEPTVPPTKPAVPVTPKKSENSEDSPK
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTQIRITKSLPKTGDTNSFAGLGVILIALSLSGLLLKRK
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2761387; 12397186 [H]