Click here to switch to the map view.

The map label for this gene is yjdI [H]

Identifier: 226222772

GI number: 226222772

Start: 139179

End: 139412

Strand: Direct

Name: yjdI [H]

Synonym: Lm4b_00137

Alternate gene names: 226222772

Gene position: 139179-139412 (Clockwise)

Preceding gene: 226222770

Following gene: 226222773

Centisome position: 4.78

GC content: 40.17

Gene sequence:

>234_bases
ATGGACGAAGAAACATTGCTAGAACGTGGCTACCGGAAGTATCGCGGGGCGGAGGTAGATATTTATTTTAATACAAATAT
TTGCGAGCATTCGGGTAATTGTGTAAAAGGTAACGCAGAACTTTTTAATTTGGATAGAAAACCATGGATTATGCCGGATA
ATGTATCGAAAGAAGAAGCGAAACGGGTGATTCATACTTGCCCGAGTGGAGCGCTTCAATATATCGAAAAATAG

Upstream 100 bases:

>100_bases
TGGAAAGTCAATGATTGGGGGAGCTTTTTCGGACGTTTTCTTTTGGGGGAAGAGTGGAATAGATGAAAGGTAGAGAAACT
TTGGCGAAGGAGGTAATCAG

Downstream 100 bases:

>100_bases
GAGGATATCAGATGGAATATAAAAACGGTGAAAATAGAATTTATGCGGTAAATGATGAAGGGGTCGAGGTTGGTGAAGTG
ACTTTTGTGCCAACTGGGGA

Product: YjdI protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MDEETLLERGYRKYRGAEVDIYFNTNICEHSGNCVKGNAELFNLDRKPWIMPDNVSKEEAKRVIHTCPSGALQYIEK

Sequences:

>Translated_77_residues
MDEETLLERGYRKYRGAEVDIYFNTNICEHSGNCVKGNAELFNLDRKPWIMPDNVSKEEAKRVIHTCPSGALQYIEK
>Mature_77_residues
MDEETLLERGYRKYRGAEVDIYFNTNICEHSGNCVKGNAELFNLDRKPWIMPDNVSKEEAKRVIHTCPSGALQYIEK

Specific function: Unknown

COG id: COG3592

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790568, Length=75, Percent_Identity=61.3333333333333, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010693 [H]

Pfam domain/function: PF06902 DUF1271 [H]

EC number: NA

Molecular weight: Translated: 8936; Mature: 8936

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEETLLERGYRKYRGAEVDIYFNTNICEHSGNCVKGNAELFNLDRKPWIMPDNVSKEEA
CCHHHHHHHHHHHHCCCEEEEEECCCEECCCCCEEECCCEEEECCCCCCCCCCCCCHHHH
KRVIHTCPSGALQYIEK
HHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MDEETLLERGYRKYRGAEVDIYFNTNICEHSGNCVKGNAELFNLDRKPWIMPDNVSKEEA
CCHHHHHHHHHHHHCCCEEEEEECCCEECCCCCEEECCCEEEECCCCCCCCCCCCCHHHH
KRVIHTCPSGALQYIEK
HHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]