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The map label for this gene is yvpB [H]

Identifier: 226222659

GI number: 226222659

Start: 25212

End: 26033

Strand: Reverse

Name: yvpB [H]

Synonym: Lm4b_00022

Alternate gene names: 226222659

Gene position: 26033-25212 (Counterclockwise)

Preceding gene: 226222669

Following gene: 226222657

Centisome position: 0.89

GC content: 38.56

Gene sequence:

>822_bases
ATGGGGAATTCTTTTAGTAAATGGGGGAAATGGATACTTGTCCTTGGGTTAATGTTCAGCGTTTTTAGTGTTTCTACAGC
TGGTCAGGCGGCGGCAAAAGAGACTGTGATTAACAAGCAAATGGTAACAACTGCAAGCCTTAATGTTCGTTCAACTAATT
CGACTTCTGGGAAAGTTATTGGTTGGCTTAAGAGCAATACAAAGTTCAAAGCGATTGCTAAAACATCGAATAACTGGTAT
CGATTTAGTTTTAAAGGAAAAAATGGCTACGTATCTGGGAAATACGTCAAGGCCGCAACTGCCGCGCCGGCACCAAAACC
TTCAACGCCAAAAATTGTGCAAATGAATGTGCCTTTAATCGTTCAGCGTCCACAATTGCCAACTGGCTGCGAGATTACAA
ACATTGCGATGATGTTGCGCTACGCTGGGAAAAATGTCGATAAAGTCAAACTTGCCAAAGAAATGAAACGTCATAAATCC
AATCCGAATTATGGTTTTGTTGGAAATCCATTCTCTAAGAGTGGCTGGACGATTTATCCACCGGCTTTAGTTAATCAAGT
TAAAAAATATACTGGGAGCGCGAAGAATATGACTGGAACAAATTTAGCTGGTATTAAAAATCAGTTGAATAAAAAACGTC
CAGTTGTAGCTTGGGTTAGTAATTTCCATGGTTTTTCCGTTCATGCGATTACTATTACAGGTTATGATAAAAATAATTTT
TACTATAACGACAGCTGGTCCGGTCAAAAAAATGCACGAATTTCGCAAAGTTATTTTAATACTTGTTGGAGCAAACAAGC
AAAACGCTCGATTTCATATTAA

Upstream 100 bases:

>100_bases
CATTTTTATAGTACCACGGCCATTTCATTTATGCAAGCGTTTTCTTTTTATTTTTCCAAAATAGGGTATACATAAGTAAT
CTGTATCAAAGGGGGATATA

Downstream 100 bases:

>100_bases
AATAAAATCCCCACTTTCGATGATGAAAGTGGGGATTTCTGATATATTAGTCGATATCTTTACCATTTGTTTCAATTACT
TTTTTGTACCAGTCGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKSNTKFKAIAKTSNNWY
RFSFKGKNGYVSGKYVKAATAAPAPKPSTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKS
NPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSNFHGFSVHAITITGYDKNNF
YYNDSWSGQKNARISQSYFNTCWSKQAKRSISY

Sequences:

>Translated_273_residues
MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKSNTKFKAIAKTSNNWY
RFSFKGKNGYVSGKYVKAATAAPAPKPSTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKS
NPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSNFHGFSVHAITITGYDKNNF
YYNDSWSGQKNARISQSYFNTCWSKQAKRSISY
>Mature_272_residues
GNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKSNTKFKAIAKTSNNWYR
FSFKGKNGYVSGKYVKAATAAPAPKPSTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKSN
PNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSNFHGFSVHAITITGYDKNNFY
YNDSWSGQKNARISQSYFNTCWSKQAKRSISY

Specific function: Unknown

COG id: COG4990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016997 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30283; Mature: 30152

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEEEECCCCCCCCEE
GWLKSNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATAAPAPKPSTPKIVQMNVPLI
EEEECCCEEEEEEECCCCEEEEEEECCCCEECCEEEEEECCCCCCCCCCCCEEEECCCEE
VQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKSNPNYGFVGNPFSKSGWTIYP
EECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEC
PALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSNFHGFSVHAITITGYDKNNF
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEEECCCCC
YYNDSWSGQKNARISQSYFNTCWSKQAKRSISY
EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVI
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEEEECCCCCCCCEE
GWLKSNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATAAPAPKPSTPKIVQMNVPLI
EEEECCCEEEEEEECCCCEEEEEEECCCCEECCEEEEEECCCCCCCCCCCCEEEECCCEE
VQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKSNPNYGFVGNPFSKSGWTIYP
EECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEC
PALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSNFHGFSVHAITITGYDKNNF
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEEECCCCC
YYNDSWSGQKNARISQSYFNTCWSKQAKRSISY
EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]