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The map label for this gene is ybhL [C]

Identifier: 225861790

GI number: 225861790

Start: 1828991

End: 1829674

Strand: Reverse

Name: ybhL [C]

Synonym: SPT_1952

Alternate gene names: 225861790

Gene position: 1829674-1828991 (Counterclockwise)

Preceding gene: 225861791

Following gene: 225861788

Centisome position: 86.63

GC content: 42.98

Gene sequence:

>684_bases
ATGAATCACACTATTATACATGACCGTGCAGGTCTCAATCAATTTTACGCTAAGGTTTATGCCTTTGTTGGTCTGGGAAT
CGGACTATCTGCTTTGGTATCAGGCCTTATGTTGACGGTCTTTCAGTCTCAGTTGGTTTACTTGTTGATGCAGGGGCGTC
TCTGGTTGACCATTGCTACTTTTGCGGAGTTGGCTTTGGTTTTCGTTGCCAGTAGCATGGCTTCAAGAAATAGTCCAGCT
GCTCTTCCAGTATTTTTACTTTACTCCGTTTTAAACGGCTTTACCCTTAGTTTTGTGGTGGCTTTCTATACTCCGGGTAC
AGTTTTATCTGCCTTTGTATCGAGCGCCCTTCTCTTCTTTGTCATGGCGGCAGTTGGTATCTTTACCAAGAAAGACTTGA
GTGGGATTGGTCGAGCAATGATGGCAGCTCTCATTGGTTTACTGATTGCTATGGTAGTCAATATTTTCTTGGCTAGTGGC
TTCTTTGATTATATGATTAGCGTAGCCATGGTTTTGGTTTTTTCAGGGTTGATTGCTTGGGATAACCAAAAGATTCGCCT
CGCCTATGAACAATCACAAGGTCGTGTAGCGACAGGCTGGGTGGTGTCAATGGCTCTCAGCATCTATCTTGATTTTATCA
ATCTTTTCCTAAGTATTCTACGTATCTTTGGTCGCAATGACTAA

Upstream 100 bases:

>100_bases
AATGTTGCAGTTGCAGCCGGTATTTTAATCTTCCATTTAAGCTAATTTTAACTTTTTTTGTTATAATCAAGGAAAGATGT
TCACAGAAAAGGAGAAAAGG

Downstream 100 bases:

>100_bases
AAGGTCTATGAAATCAGTGTTTTGAGTGACACTGATTTTTTTAAATTTTCTCTTTTCTTTTCTTGGAAATAGGTGTATAA
TACGTTTATTAAATTTTTGA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIATFAELALVFVASSMASRNSPA
ALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMVVNIFLASG
FFDYMISVAMVLVFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND

Sequences:

>Translated_227_residues
MNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIATFAELALVFVASSMASRNSPA
ALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMVVNIFLASG
FFDYMISVAMVLVFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND
>Mature_227_residues
MNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIATFAELALVFVASSMASRNSPA
ALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMVVNIFLASG
FFDYMISVAMVLVFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=229, Percent_Identity=37.9912663755458, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24763; Mature: 24763

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIAT
CCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FAELALVFVASSMASRNSPAALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VMAAVGIFTKKDLSGIGRAMMAALIGLLIAMVVNIFLASGFFDYMISVAMVLVFSGLIAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIAT
CCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FAELALVFVASSMASRNSPAALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VMAAVGIFTKKDLSGIGRAMMAALIGLLIAMVVNIFLASGFFDYMISVAMVLVFSGLIAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]