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The map label for this gene is sepF [H]

Identifier: 225861492

GI number: 225861492

Start: 1524575

End: 1525114

Strand: Reverse

Name: sepF [H]

Synonym: SPT_1603

Alternate gene names: 225861492

Gene position: 1525114-1524575 (Counterclockwise)

Preceding gene: 225861493

Following gene: 225861491

Centisome position: 72.21

GC content: 37.96

Gene sequence:

>540_bases
ATGTCTTTAAAAGATAGATTCGATAGATTTATAGATTATTTTACGGAGGATGAGGATTCAAGTCTCCCTTATGAAAAAAG
AGATGAGCCTGTGTTTACTTCAGTAAATTCTTCACAGGAACCGGCTCTCCCAATGAATCAACCTTCACAGTCGGCTGGTA
CAAAAGAGAACAATATCACCAGACTTCATGCAAGACAACAGGAATTGGCAAATCAGAGTCAGCGTGCAACGGATAAGGTC
ATTATAGATGTTCGTTATCCTAGAAAATATGAGGATGCAACAGAAATTGTTGATTTATTGGCAGGAAACGAAAGTATCTT
GATTGATTTTCAGTATATGACAGAGGTGCAGGCTCGTCGTTGTTTGGACTATTTGGATGGAGCTTGTCATGTTTTAGCTG
GAAATTTGAAAAAGGTAGCTTCTACCATGTATTTGTTGACACCAGTGAACGTTATTGTAAATGTTGAAGATATCCGTTTA
CCAGATGAAGATCAACAGGGTGAGTTCGGTTTTGATATGAAGCGAAATAGAGTACGATAA

Upstream 100 bases:

>100_bases
CGAGTTAAGTATGGGAATGAGTCGTGATTATAAAGAAGCGATTCAATTCGGTTCCACTTTTGTTCGTATAGGTACATCAT
TTTTTAAGTAGGAGAGAACC

Downstream 100 bases:

>100_bases
TGATTTTTTTAATTCGTATGATTTATAATGCAGTGGATATTTACTCCCTGATTTTGGTAGCCTTCGCTGTCATGTCTTGG
TTTCCAGGTGCCTACGAATC

Product: YlmF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTSVNSSQEPALPMNQPSQSAGTKENNITRLHARQQELANQSQRATDKV
IIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARRCLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRL
PDEDQQGEFGFDMKRNRVR

Sequences:

>Translated_179_residues
MSLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTSVNSSQEPALPMNQPSQSAGTKENNITRLHARQQELANQSQRATDKV
IIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARRCLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRL
PDEDQQGEFGFDMKRNRVR
>Mature_178_residues
SLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTSVNSSQEPALPMNQPSQSAGTKENNITRLHARQQELANQSQRATDKVI
IDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARRCLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRLP
DEDQQGEFGFDMKRNRVR

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 20627; Mature: 20496

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTSVNSSQEPALPMNQPSQSAGTKENNIT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
RLHARQQELANQSQRATDKVIIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
CLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRLPDEDQQGEFGFDMKRNRVR
HHHHHCHHHHHHHHHHHHHHHHHHHEEHHEEEEEHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTSVNSSQEPALPMNQPSQSAGTKENNIT
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
RLHARQQELANQSQRATDKVIIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
CLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRLPDEDQQGEFGFDMKRNRVR
HHHHHCHHHHHHHHHHHHHHHHHHHEEHHEEEEEHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA