Click here to switch to the map view.

The map label for this gene is yrrN [H]

Identifier: 225861295

GI number: 225861295

Start: 1332879

End: 1333808

Strand: Reverse

Name: yrrN [H]

Synonym: SPT_1398

Alternate gene names: 225861295

Gene position: 1333808-1332879 (Counterclockwise)

Preceding gene: 225861297

Following gene: 225861294

Centisome position: 63.15

GC content: 41.94

Gene sequence:

>930_bases
ATGGAAAAGATTGTCATTACAGCAACTGCTGAAAGTATTGAACAAGTTGAACAACTACTCGAAGCTGGCGTAGACCGTAT
CTATGTCGGTGAGAAAGATTTTGGCCTTCGTCTGCCAACGACCTTTAGTTATGACCAATTACGTGAAATCGCTAAGTTGG
TTCATGATGCTGGTAAGGAATTGATCGTTGCGGTCAATGCTCTCATGCACCAAGATATGATGGACCGTATCAAGCCTTTC
TTAGACTTCTTGGAAGAAATCAAGACAGACTATATTACGATTGGGGATGCAGGCGTCTTTTACGTAGTTAACCGCGATGG
TTATTCATTTAAGACCATCTACGATGCTTCAACCATGGTAACTAGCAGTCGTCAGATTAACTTCTGGGGACAAAAGGCTG
GCGCATCTGAGGCTGTTTTGGCGCGTGAAATTCCATCAGCTGAACTTTTCAAAATGCCAGAGATTTTGGAAATTCCTGCT
GAAGTTTTGGTTTACGGTGCTAGCGTCATCCATCATTCTAAACGTCCACTCTTGCAAAACTACTATAACTTTACACATAT
CGATGATGAAAAGACGCATAAACGTGACCTCTTCTTGGCTGAGCCAAGTGATCCAGAGAGCCACTATTCCATTTTTGAAG
ATAATCATGGGACCCATATCTTTGCCAACAATGACCTTGATTTGATGATCAAATTAACAGAATTGGTGGAGCATGGCTTT
ACTCGCTGGAAACTAGAAGGGCTCTACACTCCTGGTCAGAACTTTGTTGAGATTGCAAAACTCTTTATCCAAGCGCGTAA
CTTGATTCAAGAGGGCAACTTTAGCCATGATCAAGCCTTCTTGCTGGATGAAGAAGTTCGTAAACTTCACCCTAAAAACC
GTTTCCTTGATACAGGATTTTATGACTACGATCCTGACATGGTTAGATAA

Upstream 100 bases:

>100_bases
TTCGGCAGAGAATTATTACAGAAAGGTTACAAAAAGAATAAAGTCCCTTTTCATTTTCAAAGCATGGATGATTTTGGAGA
AATGTGGTATAATTTTTCTT

Downstream 100 bases:

>100_bases
AATACATGATTCGTTGAGAGAAGGAAGATGCAAACATTTCTTCTCTCAATTTTTCGTATTTCTTCACTATTTTACAAAAA
TCAGCAGGCTAGAATGCTCT

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKELIVAVNALMHQDMMDRIKPF
LDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMVTSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPA
EVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
TRWKLEGLYTPGQNFVEIAKLFIQARNLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR

Sequences:

>Translated_309_residues
MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKELIVAVNALMHQDMMDRIKPF
LDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMVTSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPA
EVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
TRWKLEGLYTPGQNFVEIAKLFIQARNLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR
>Mature_309_residues
MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKELIVAVNALMHQDMMDRIKPF
LDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMVTSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPA
EVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
TRWKLEGLYTPGQNFVEIAKLFIQARNLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 35588; Mature: 35588

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKE
CCEEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCHH
LIVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEEEECCHHHE
TSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQN
ECCCEEEECCCCCCCCHHHHHHCCCCHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCHHHH
YYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
CCCCEECCCCCCCCCCEEEECCCCCCCCCCEEECCCCCEEEECCCCEEEHHHHHHHHCCC
TRWKLEGLYTPGQNFVEIAKLFIQARNLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGF
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCC
YDYDPDMVR
CCCCCCCCC
>Mature Secondary Structure
MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKE
CCEEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCHH
LIVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEEEECCHHHE
TSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQN
ECCCEEEECCCCCCCCHHHHHHCCCCHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCHHHH
YYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
CCCCEECCCCCCCCCCEEEECCCCCCCCCCEEECCCCCEEEECCCCEEEHHHHHHHHCCC
TRWKLEGLYTPGQNFVEIAKLFIQARNLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGF
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCC
YDYDPDMVR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]