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The map label for this gene is pyrK [H]

Identifier: 225861150

GI number: 225861150

Start: 1183421

End: 1184221

Strand: Reverse

Name: pyrK [H]

Synonym: SPT_1240

Alternate gene names: 225861150

Gene position: 1184221-1183421 (Counterclockwise)

Preceding gene: 225861151

Following gene: 225861149

Centisome position: 56.07

GC content: 44.82

Gene sequence:

>801_bases
ATGAATCTCACATGTAAGAAGCGTTTGGGTGTCATTCGGTTGGAAACCATGAAGGTGGTTGCACAAGAGGAAATCGCGCC
AGCAATCTTTGAATTAGTCCTAGAAGGAGAAATGGTTGAAGCCATGCGAGCAGGCCAATTTCTTCATCTGCGTGTACCAG
ACGATGCCCATCTCTTACGTCGTCCTATTTCAATTTCGTCTATTGACAAGGCAAACAAGCAGTGTCACCTCATTTATCGG
ATTGAGGGAGCTGGGACTGCAATTTTTTCAACCTTAAGTCAGGGAGACACTCTTGATGTGATGGGGCCTCAGGGAAATGG
TTTTGACTTGTCTGACCTTGATGAGCAGAATCAGGTTCTCCTTGTTGGTGGTGGGATTGGTGTTCCACCCTTGCTTGAGG
TGGCCAAGGAATTGCATGAACGTGGAGTGAAAGTAGTGACAGTCCTCGGTTTTGCTAATAAGGATGCTGTTATTTTGAAA
ACGGAATTGGCTCAGTATGGTCAGGTCTTTGTAACGACAGATGATGGTTCTTATGGCATCAAGGGAAATGTTTCCGTTGT
TATCAATGATTTAGATAGTCAGTTTGATGCTGTTTACTCGTGTGGGGCTCCAGGAATGATGAAGTATATCAATCAAACCT
TTGATGATCACCCAAGAGCCTATTTATCTCTGGAATCTCGTATGGCTTGTGGGATGGGAGCTTGCTATGCCTGTGTTCTA
AAAGTACCAGAAAACGAGACGGTCAGCCAACGCGTCTGTGAAGATGGTCCTGTTTTCCGCACAGGAACAGTTGTATTATA
A

Upstream 100 bases:

>100_bases
TTTGAGTGTGCTCTCTTGTGTTGTACGATTTTAACTGAGGCCTTGCACTAGCAAGGTCTTTTCTTTATCTGGTCCCCTTA
AAATTTAAGGAGGAAAAGTT

Downstream 100 bases:

>100_bases
GGAGAAAATTATGACTACAAATCGATTACAAGTTTCTCTACCTGGTTTGGATTTGAAAAATCCGATTATTCCAGCATCAG
GCTGTTTTGGCTTTGGACAA

Product: dihydroorotate dehydrogenase electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNLTCKKRLGVIRLETMKVVAQEEIAPAIFELVLEGEMVEAMRAGQFLHLRVPDDAHLLRRPISISSIDKANKQCHLIYR
IEGAGTAIFSTLSQGDTLDVMGPQGNGFDLSDLDEQNQVLLVGGGIGVPPLLEVAKELHERGVKVVTVLGFANKDAVILK
TELAQYGQVFVTTDDGSYGIKGNVSVVINDLDSQFDAVYSCGAPGMMKYINQTFDDHPRAYLSLESRMACGMGACYACVL
KVPENETVSQRVCEDGPVFRTGTVVL

Sequences:

>Translated_266_residues
MNLTCKKRLGVIRLETMKVVAQEEIAPAIFELVLEGEMVEAMRAGQFLHLRVPDDAHLLRRPISISSIDKANKQCHLIYR
IEGAGTAIFSTLSQGDTLDVMGPQGNGFDLSDLDEQNQVLLVGGGIGVPPLLEVAKELHERGVKVVTVLGFANKDAVILK
TELAQYGQVFVTTDDGSYGIKGNVSVVINDLDSQFDAVYSCGAPGMMKYINQTFDDHPRAYLSLESRMACGMGACYACVL
KVPENETVSQRVCEDGPVFRTGTVVL
>Mature_266_residues
MNLTCKKRLGVIRLETMKVVAQEEIAPAIFELVLEGEMVEAMRAGQFLHLRVPDDAHLLRRPISISSIDKANKQCHLIYR
IEGAGTAIFSTLSQGDTLDVMGPQGNGFDLSDLDEQNQVLLVGGGIGVPPLLEVAKELHERGVKVVTVLGFANKDAVILK
TELAQYGQVFVTTDDGSYGIKGNVSVVINDLDSQFDAVYSCGAPGMMKYINQTFDDHPRAYLSLESRMACGMGACYACVL
KVPENETVSQRVCEDGPVFRTGTVVL

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 28911; Mature: 28911

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTCKKRLGVIRLETMKVVAQEEIAPAIFELVLEGEMVEAMRAGQFLHLRVPDDAHLLR
CCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCHHHHH
RPISISSIDKANKQCHLIYRIEGAGTAIFSTLSQGDTLDVMGPQGNGFDLSDLDEQNQVL
CCCCCHHHCCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEE
LVGGGIGVPPLLEVAKELHERGVKVVTVLGFANKDAVILKTELAQYGQVFVTTDDGSYGI
EEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECHHHCCEEEEEECCCCCCC
KGNVSVVINDLDSQFDAVYSCGAPGMMKYINQTFDDHPRAYLSLESRMACGMGACYACVL
CCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCEEEEEE
KVPENETVSQRVCEDGPVFRTGTVVL
ECCCCCCHHHHHCCCCCEEECCCEEC
>Mature Secondary Structure
MNLTCKKRLGVIRLETMKVVAQEEIAPAIFELVLEGEMVEAMRAGQFLHLRVPDDAHLLR
CCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCHHHHH
RPISISSIDKANKQCHLIYRIEGAGTAIFSTLSQGDTLDVMGPQGNGFDLSDLDEQNQVL
CCCCCHHHCCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEE
LVGGGIGVPPLLEVAKELHERGVKVVTVLGFANKDAVILKTELAQYGQVFVTTDDGSYGI
EEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECHHHCCEEEEEECCCCCCC
KGNVSVVINDLDSQFDAVYSCGAPGMMKYINQTFDDHPRAYLSLESRMACGMGACYACVL
CCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCEEEEEE
KVPENETVSQRVCEDGPVFRTGTVVL
ECCCCCCHHHHHCCCCCEEECCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]