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The map label for this gene is yurM [H]

Identifier: 225859936

GI number: 225859936

Start: 2105813

End: 2106652

Strand: Reverse

Name: yurM [H]

Synonym: SP70585_2290

Alternate gene names: 225859936

Gene position: 2106652-2105813 (Counterclockwise)

Preceding gene: 225859937

Following gene: 225859935

Centisome position: 96.43

GC content: 31.9

Gene sequence:

>840_bases
ATGAATACACATATAAATGGTATTAGTAAAAAAGGCAAAGTTCTTATATATGGTTATATGCTCCTTACCATTTTAATTTC
TATTTTCCCTATTGCGTGGATTTTTTTATCATCATTAAAAGCAGATCCTATGAAAAATCCAGGTATTAGTTTACCGACTG
ACTTTACTCTTGAAGGTTATATAAATGTTTTTACAAAACTTCATGTTTTCACTTACTTTTGGAATAGCTTTAAAGTAGTG
TCTATATCAGTTATTATTAGCATTGTTATGATCTCCATGTCTTCATATGTTATTGCTAGGATGGAATTTAGAGGGAAGAA
GTTGGTGACTTCTATGCTGTATTCTACTCTATTTATTCCAGCAACAGCTATGACTTTTCCAGTTTATAGATTAGTAAATG
AGTTGGGGATTTATAATACCCCAGTTGCTCTAATTCTGGTCTACTCTTGTAGTGGAATTGCTATGAGTTTCTTTATTATA
AAGAACTATTTTGAAATTATTCCAAAAGAATTGGAGGAGGCAGCAGAGATTGATGGTGCGACATATGCTCAAACTTTTTG
GAAAGTGATGTTGCCAATTGCTAGACCAGGAATTTTAACAGCAGCAGTACTTGCCTTTATTAACAACTGGAATGAATATT
ATTGGGCATCTATGTTGGTGATTGATAAAAATGAATTAACAGTACCAGCATTACTAGGTCAATTTACTACAAGTTTTAAT
ACTAATTATAATGGTCTATTTTCAGCTATTGTTGTAATCGTATTACCACCAATCATTCTATTCGCATTTACAAGTAAATA
CTTCATTGAAGCTTTAGGAGGAGGAGCAGTAAAAGGATGA

Upstream 100 bases:

>100_bases
ATACAATTGGAGTTATACAAATCTTAGGTGGAATGTTGATTATCGTTTGTATTAATATTTTATTCAGAGAAAGAAAAAGA
CTGAAAGGTGGGAAATGATT

Downstream 100 bases:

>100_bases
AACATACACTTGAAACTATCAATAGTAGAACTCAGTGGTTTAGAGAAGCAAGATTTGGGATGTTCATTCATTGGGGGTTA
TATTCTATTCCAGGAAAAGG

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNTHINGISKKGKVLIYGYMLLTILISIFPIAWIFLSSLKADPMKNPGISLPTDFTLEGYINVFTKLHVFTYFWNSFKVV
SISVIISIVMISMSSYVIARMEFRGKKLVTSMLYSTLFIPATAMTFPVYRLVNELGIYNTPVALILVYSCSGIAMSFFII
KNYFEIIPKELEEAAEIDGATYAQTFWKVMLPIARPGILTAAVLAFINNWNEYYWASMLVIDKNELTVPALLGQFTTSFN
TNYNGLFSAIVVIVLPPIILFAFTSKYFIEALGGGAVKG

Sequences:

>Translated_279_residues
MNTHINGISKKGKVLIYGYMLLTILISIFPIAWIFLSSLKADPMKNPGISLPTDFTLEGYINVFTKLHVFTYFWNSFKVV
SISVIISIVMISMSSYVIARMEFRGKKLVTSMLYSTLFIPATAMTFPVYRLVNELGIYNTPVALILVYSCSGIAMSFFII
KNYFEIIPKELEEAAEIDGATYAQTFWKVMLPIARPGILTAAVLAFINNWNEYYWASMLVIDKNELTVPALLGQFTTSFN
TNYNGLFSAIVVIVLPPIILFAFTSKYFIEALGGGAVKG
>Mature_279_residues
MNTHINGISKKGKVLIYGYMLLTILISIFPIAWIFLSSLKADPMKNPGISLPTDFTLEGYINVFTKLHVFTYFWNSFKVV
SISVIISIVMISMSSYVIARMEFRGKKLVTSMLYSTLFIPATAMTFPVYRLVNELGIYNTPVALILVYSCSGIAMSFFII
KNYFEIIPKELEEAAEIDGATYAQTFWKVMLPIARPGILTAAVLAFINNWNEYYWASMLVIDKNELTVPALLGQFTTSFN
TNYNGLFSAIVVIVLPPIILFAFTSKYFIEALGGGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=27.112676056338, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1790464, Length=218, Percent_Identity=35.7798165137615, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789860, Length=207, Percent_Identity=27.536231884058, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31219; Mature: 31219

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTHINGISKKGKVLIYGYMLLTILISIFPIAWIFLSSLKADPMKNPGISLPTDFTLEGY
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
INVFTKLHVFTYFWNSFKVVSISVIISIVMISMSSYVIARMEFRGKKLVTSMLYSTLFIP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAMTFPVYRLVNELGIYNTPVALILVYSCSGIAMSFFIIKNYFEIIPKELEEAAEIDGA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TYAQTFWKVMLPIARPGILTAAVLAFINNWNEYYWASMLVIDKNELTVPALLGQFTTSFN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEEEEEECCCCCHHHHHHHHHHHCC
TNYNGLFSAIVVIVLPPIILFAFTSKYFIEALGGGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTHINGISKKGKVLIYGYMLLTILISIFPIAWIFLSSLKADPMKNPGISLPTDFTLEGY
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
INVFTKLHVFTYFWNSFKVVSISVIISIVMISMSSYVIARMEFRGKKLVTSMLYSTLFIP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAMTFPVYRLVNELGIYNTPVALILVYSCSGIAMSFFIIKNYFEIIPKELEEAAEIDGA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TYAQTFWKVMLPIARPGILTAAVLAFINNWNEYYWASMLVIDKNELTVPALLGQFTTSFN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEEEEEECCCCCHHHHHHHHHHHCC
TNYNGLFSAIVVIVLPPIILFAFTSKYFIEALGGGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]