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The map label for this gene is secY

Identifier: 225859515

GI number: 225859515

Start: 1674772

End: 1675989

Strand: Reverse

Name: secY

Synonym: SP70585_1804

Alternate gene names: 225859515

Gene position: 1675989-1674772 (Counterclockwise)

Preceding gene: 225859516

Following gene: 225859514

Centisome position: 76.72

GC content: 36.7

Gene sequence:

>1218_bases
ATGACTAAGATTTATTCGTCAATAGCAGTAAAAAAAGGACTATTTACCTTATTTCTACTGTTTATCTATGTATTGGGAAG
TCGTATTACTCTCCCTTTTGTTGACCTAAATACTAAAGATTTTTTAGGAGGTTCAACAGCCTATCTAGCCTTCTCAGCCG
CCCTAACAGGTGGAAATCTAAGAAGTTTGTCAATTTTTTCTGTTGGATTATCCCCTTGGATGTCAGCTATGATTTTGTGG
CAGATGTTTTCATATTCTAAAAAATTGGGGCTAAGTTCTACAGCGATTGAAATTCAAGATCGTCGAAGAATGTATCTGAC
CTTGCTAATTGCTGTGATTCAATCCTTGGCAGTTAGCTTGAGCTTGCCAGTACAATCCTCCTACTCGGTAATTTTGGTTG
CTCTAATGAATACCTTGTTACTCATAGCAGGAACGTTTTTTCTTGTTTGGTTGTCAGATTTAAATGCGAGCATGGGAATT
GGGGGTTCTATTGTAATCCTCCTATCCAGCATTGTTTTAAATATCCCTCAGGATGTTATTGAAACTTTTAAACTGGTTTA
TATCCCTACAGGGATTGTTGTCTTGCTTGTTTTTATGACCATTATATTTTCTTACTTGCTTGCCCTTATGTATCGAGCTC
GCTATTTGGTTCCTGTTAATAAAATTGGCTTACACAATCGATTTAAACGCTATTCTTATCTCGAAATCATGTTGAATCCT
GCAGGTGGGATGCCTTATATGTATGTGATGAGTTTTCTTAGTGTACCAGCTTATTTGTTCATCTTGTTGGGATTTATTTT
CCCTAATCATTCAGGGCTAGCGGCTTTATCAAAGGAATTTATGGTTGGGAAGCCTTTGTGGGTCTATGTTTATATTTCGG
TCTTATTTTTATTTAGTATCATTTTTGCTTTTGTTACGATGAATGGAGAAGAGATTGCAGACCGTATGAAAAAATCTGGA
GAATACATTTATGGTATTTATCCAGGTGCGGATACTAGTCGATTTATTAATCGATTGGTCCTTCGTTTCTCAGTCATAGG
TGGTCTCTTTAATGTGATTATGGCAGGTGGTCCCATGCTTTTTGTTTTGTTTGATGAAAAGTTATTACGATTGGCAATGA
TTCCAGGCTTATTTATGATGTTCGGGGGCATGATTTTTACGATTAGAGACGAGGTCAAGGCTTTAAGGCTAAATGAGACC
TATAGACCTTTGATTTAG

Upstream 100 bases:

>100_bases
TAAAGTTGTTTTTTGATGCAGAACAAAGAAATGGTAAAAGTTGAAATAAAAGAATTGTTATTTACCATATCACAAACAAT
GAAGGTGAGGGGAGTGTTTT

Downstream 100 bases:

>100_bases
GAGACTTTTATGTATTATTTTATTCCAGCTTGGTATGGGTCAGAAAGAACATGGCATGCAGATATCACTCCATGGTATTT
TTCTCATTTTCGTCTAGAGT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTKIYSSIAVKKGLFTLFLLFIYVLGSRITLPFVDLNTKDFLGGSTAYLAFSAALTGGNLRSLSIFSVGLSPWMSAMILW
QMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSLSLPVQSSYSVILVALMNTLLLIAGTFFLVWLSDLNASMGI
GGSIVILLSSIVLNIPQDVIETFKLVYIPTGIVVLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
AGGMPYMYVMSFLSVPAYLFILLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSIIFAFVTMNGEEIADRMKKSG
EYIYGIYPGADTSRFINRLVLRFSVIGGLFNVIMAGGPMLFVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNET
YRPLI

Sequences:

>Translated_405_residues
MTKIYSSIAVKKGLFTLFLLFIYVLGSRITLPFVDLNTKDFLGGSTAYLAFSAALTGGNLRSLSIFSVGLSPWMSAMILW
QMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSLSLPVQSSYSVILVALMNTLLLIAGTFFLVWLSDLNASMGI
GGSIVILLSSIVLNIPQDVIETFKLVYIPTGIVVLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
AGGMPYMYVMSFLSVPAYLFILLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSIIFAFVTMNGEEIADRMKKSG
EYIYGIYPGADTSRFINRLVLRFSVIGGLFNVIMAGGPMLFVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNET
YRPLI
>Mature_404_residues
TKIYSSIAVKKGLFTLFLLFIYVLGSRITLPFVDLNTKDFLGGSTAYLAFSAALTGGNLRSLSIFSVGLSPWMSAMILWQ
MFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSLSLPVQSSYSVILVALMNTLLLIAGTFFLVWLSDLNASMGIG
GSIVILLSSIVLNIPQDVIETFKLVYIPTGIVVLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNPA
GGMPYMYVMSFLSVPAYLFILLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSIIFAFVTMNGEEIADRMKKSGE
YIYGIYPGADTSRFINRLVLRFSVIGGLFNVIMAGGPMLFVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNETY
RPLI

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=365, Percent_Identity=24.3835616438356, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 45398; Mature: 45267

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIYSSIAVKKGLFTLFLLFIYVLGSRITLPFVDLNTKDFLGGSTAYLAFSAALTGGNL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCHHHHHEEHHCCCCCC
RSLSIFSVGLSPWMSAMILWQMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSL
EEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEE
SLPVQSSYSVILVALMNTLLLIAGTFFLVWLSDLNASMGIGGSIVILLSSIVLNIPQDVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH
ETFKLVYIPTGIVVLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHCEEEEEEEEC
AGGMPYMYVMSFLSVPAYLFILLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IFAFVTMNGEEIADRMKKSGEYIYGIYPGADTSRFINRLVLRFSVIGGLFNVIMAGGPML
HHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNETYRPLI
EEEEHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TKIYSSIAVKKGLFTLFLLFIYVLGSRITLPFVDLNTKDFLGGSTAYLAFSAALTGGNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCHHHHHEEHHCCCCCC
RSLSIFSVGLSPWMSAMILWQMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSL
EEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEE
SLPVQSSYSVILVALMNTLLLIAGTFFLVWLSDLNASMGIGGSIVILLSSIVLNIPQDVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH
ETFKLVYIPTGIVVLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHCEEEEEEEEC
AGGMPYMYVMSFLSVPAYLFILLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IFAFVTMNGEEIADRMKKSGEYIYGIYPGADTSRFINRLVLRFSVIGGLFNVIMAGGPML
HHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNETYRPLI
EEEEHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]