| Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_012441 |
| Length | 2,125,701 |
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The map label for this gene is trx [C]
Identifier: 225853532
GI number: 225853532
Start: 2048962
End: 2049285
Strand: Direct
Name: trx [C]
Synonym: BMEA_A2165
Alternate gene names: 225853532
Gene position: 2048962-2049285 (Clockwise)
Preceding gene: 225853531
Following gene: 225853544
Centisome position: 96.39
GC content: 58.02
Gene sequence:
>324_bases ATGGCAACCGTCAAGGTCGATAACAGCAACTTTCAATCGGACGTTCTCCAGTCGAGCGAGCCGGTTGTAGTGGATTTCTG GGCAGAATGGTGCGGACCATGCAAGACGATCGCTCCGGCTCTGGACGAAATCGCCGCTGAAATGGCTGGCCAGGTCAAGA TTGCCAAGGTCAATATCGACGAGAACCCGGAGCTGGCCGCCCAGTTCGGTGTGCGCTCCATCCCGACGCTTCTGATGTTC AAGGATGGCGAGCTTGCTGCCAATATGGTTGGCGCCGCTCCCAAGAGCCGCCTTGCCGACTGGATCAAGGCATCGGCTGC GTAA
Upstream 100 bases:
>100_bases AGTTAGAGCGGTTCCGGCGATTCTGTTAAAATAGAAACTGCTCTAGCGCGTGAGTCTATAGAAGAACATCGCCATTCTAC CAAAGAGGAGGATTAGTTCC
Downstream 100 bases:
>100_bases TAAAGATCACCATTACAAAAATGGAAAAACCCGGCCTTTGCGCCGGGTCAGATTGATGAAAAACCCCTCGATTTTTGGCA GCAGTCAAAAACGAGGGGTT
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MATVKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKTIAPALDEIAAEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMF KDGELAANMVGAAPKSRLADWIKASAA
Sequences:
>Translated_107_residues MATVKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKTIAPALDEIAAEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMF KDGELAANMVGAAPKSRLADWIKASAA >Mature_106_residues ATVKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKTIAPALDEIAAEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMFK DGELAANMVGAAPKSRLADWIKASAA
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=97, Percent_Identity=41.2371134020619, Blast_Score=92, Evalue=9e-20, Organism=Homo sapiens, GI5031973, Length=97, Percent_Identity=32.9896907216495, Blast_Score=68, Evalue=1e-12, Organism=Homo sapiens, GI21361657, Length=101, Percent_Identity=35.6435643564356, Blast_Score=65, Evalue=1e-11, Organism=Homo sapiens, GI20070125, Length=100, Percent_Identity=32, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87082331, Length=104, Percent_Identity=51.9230769230769, Blast_Score=125, Evalue=8e-31, Organism=Escherichia coli, GI1788936, Length=91, Percent_Identity=43.956043956044, Blast_Score=101, Evalue=1e-23, Organism=Escherichia coli, GI87081747, Length=93, Percent_Identity=36.5591397849462, Blast_Score=71, Evalue=2e-14, Organism=Caenorhabditis elegans, GI212646193, Length=94, Percent_Identity=42.5531914893617, Blast_Score=92, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17554386, Length=102, Percent_Identity=38.2352941176471, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115532378, Length=72, Percent_Identity=44.4444444444444, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115532380, Length=72, Percent_Identity=44.4444444444444, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17544108, Length=72, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71980562, Length=90, Percent_Identity=35.5555555555556, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17556044, Length=85, Percent_Identity=37.6470588235294, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71980565, Length=87, Percent_Identity=35.632183908046, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17509965, Length=89, Percent_Identity=31.4606741573034, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71998175, Length=93, Percent_Identity=38.7096774193548, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17549970, Length=77, Percent_Identity=32.4675324675325, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17510299, Length=91, Percent_Identity=35.1648351648352, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=86, Percent_Identity=44.1860465116279, Blast_Score=73, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6319925, Length=93, Percent_Identity=32.258064516129, Blast_Score=72, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321648, Length=86, Percent_Identity=39.5348837209302, Blast_Score=70, Evalue=9e-14, Organism=Drosophila melanogaster, GI28573567, Length=94, Percent_Identity=41.4893617021277, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI24639826, Length=96, Percent_Identity=39.5833333333333, Blast_Score=85, Evalue=9e-18, Organism=Drosophila melanogaster, GI21358065, Length=96, Percent_Identity=39.5833333333333, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI17648013, Length=88, Percent_Identity=42.0454545454545, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI24583090, Length=88, Percent_Identity=42.0454545454545, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI24664269, Length=75, Percent_Identity=38.6666666666667, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI19921434, Length=79, Percent_Identity=39.2405063291139, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI24639068, Length=91, Percent_Identity=32.967032967033, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI17530795, Length=92, Percent_Identity=29.3478260869565, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11421; Mature: 11290
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKTIAPALDEIAAEMAGQVKIAKVNID CCEEEECCCCCHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCC ENPELAAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWIKASAA CCCHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure ATVKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKTIAPALDEIAAEMAGQVKIAKVNID CEEEECCCCCHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCC ENPELAAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWIKASAA CCCHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7021558 [H]