| Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_012441 |
| Length | 2,125,701 |
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The map label for this gene is yleA [C]
Identifier: 225853371
GI number: 225853371
Start: 1883112
End: 1884395
Strand: Direct
Name: yleA [C]
Synonym: BMEA_A1990
Alternate gene names: 225853371
Gene position: 1883112-1884395 (Clockwise)
Preceding gene: 225853370
Following gene: 225853372
Centisome position: 88.59
GC content: 60.12
Gene sequence:
>1284_bases ATGTCTGTGGAAATCGTCACCTTCGGATGCCGCCTCAACACCTATGAATCGGAAGTGATGAGGCGCGAAGCCGACGCTGC CGGGCTGGGCACGCTGAAAGACGGCGCGATCATCTTCAACACCTGCGCAGTGACGGCGGAAGCGGTGCGCCAGGCGCGCC AGGCAATTCGCAAGGCGCGCCGTGAAAACCCTGACGCGCGCATCATCGTCACCGGCTGCGCCGCACAGACCGAAGCCGAC AATTTCGCCGCCATGGGCGAAGTGGACCTTGTCCTCGGCAATGAGGAGAAGCTGAAATCCAATTCCTACCGGATGCTGCC GGATTTCGGCGTTAACCAGTTCGAAAAGGTGCGCGTCAACGACATTATGGAAGTGCGCGAAACCGCAAGCCATATGGTCG ATGCCATTGAAGGCCGGGCGCGCGCTTTCGTGCAGGTGCAAAATGGCTGCGACCACCGCTGTACTTTCTGCATCATTCCC TATGGGCGCGGCAATTCGCGTTCCGTGCCGATGGGCGCAGTCGTCGATCAGGTGAAGCGGCTTGTCGGCAACGGCTATGC CGAAGTGGTGCTGACCGGCGTGGACATGACATCCTACGGCCCCGACCTTCCCAGCAATCTTCGCCTGGGCAAGCTGGTAA AAACCGTGCTGGCGCAAGTGCCGGATTTGCAGCGCCTGCGTCTTTCCTCCATCGATTCCATCGAGGCCGATGAGGATCTG ATGGAAGCGATTGCCAGTGAAAAGCGCCTGATGCCACATCTGCACCTGTCGCTACAGGCTGGCGACGACATGATCCTGAA GCGCATGAAGCGCCGCCATCTGCGCGACGATTCCATTCGCTTTTGCCAAACAGCGCGCGCTCTTCGCCCTGATATCGTGT TCGGCGCGGATATCATCGCCGGTTTCCCGACCGAGACCGAGGAAATGTTCCAGAACTCGCTGAAGATTGTCGAGGAATGC GGCCTTACCCATCTGCATGTCTTCCCCTATAGCCCGCGCGAGGGAACACCCGCAGCACGGATGCCGCAGGTACGGCGCGA AATCGTCAAGGAACGCGCAGCCCGCCTGCGCGCCGAAGGCGACCGCGCCTATGAAAAGCACCTCAACGCGCTTCACGGCA CACGCCAGCGCCTGCTGGTCGAGAAAGAAGGTGTTGCCCGCACGGAGGGCTTCACGCTGGCCGCTGTGGATCAGGGCAAT GCTGGCGAAATTATCGAACGAATTGTGACGGGACATGACGGTGAAAAACTCCTCACACGTCAGGCAGAGCCGCAAGCGGC TTAA
Upstream 100 bases:
>100_bases AATGGGAATTCTCCGGCACCTTCGATCCTGCAACCGGCGAATGGAGCCGCGACACGCAGGGTTTGCAGGGTTCCGGCAAC GCCGACAGGGGGGCTGCCTG
Downstream 100 bases:
>100_bases AGCTTAAGGGCATCAGATTTCATGGCAATGGGTTTCATCAAGAAAATGTTCTCCTTCGGCAAGAAGGAGGTCGAAGAAAA GCCGGCTGAACAACCGGCAC
Product: MiaB-like tRNA modifying enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSVEIVTFGCRLNTYESEVMRREADAAGLGTLKDGAIIFNTCAVTAEAVRQARQAIRKARRENPDARIIVTGCAAQTEAD NFAAMGEVDLVLGNEEKLKSNSYRMLPDFGVNQFEKVRVNDIMEVRETASHMVDAIEGRARAFVQVQNGCDHRCTFCIIP YGRGNSRSVPMGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDLPSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEADEDL MEAIASEKRLMPHLHLSLQAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVEEC GLTHLHVFPYSPREGTPAARMPQVRREIVKERAARLRAEGDRAYEKHLNALHGTRQRLLVEKEGVARTEGFTLAAVDQGN AGEIIERIVTGHDGEKLLTRQAEPQAA
Sequences:
>Translated_427_residues MSVEIVTFGCRLNTYESEVMRREADAAGLGTLKDGAIIFNTCAVTAEAVRQARQAIRKARRENPDARIIVTGCAAQTEAD NFAAMGEVDLVLGNEEKLKSNSYRMLPDFGVNQFEKVRVNDIMEVRETASHMVDAIEGRARAFVQVQNGCDHRCTFCIIP YGRGNSRSVPMGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDLPSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEADEDL MEAIASEKRLMPHLHLSLQAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVEEC GLTHLHVFPYSPREGTPAARMPQVRREIVKERAARLRAEGDRAYEKHLNALHGTRQRLLVEKEGVARTEGFTLAAVDQGN AGEIIERIVTGHDGEKLLTRQAEPQAA >Mature_426_residues SVEIVTFGCRLNTYESEVMRREADAAGLGTLKDGAIIFNTCAVTAEAVRQARQAIRKARRENPDARIIVTGCAAQTEADN FAAMGEVDLVLGNEEKLKSNSYRMLPDFGVNQFEKVRVNDIMEVRETASHMVDAIEGRARAFVQVQNGCDHRCTFCIIPY GRGNSRSVPMGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDLPSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEADEDLM EAIASEKRLMPHLHLSLQAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVEECG LTHLHVFPYSPREGTPAARMPQVRREIVKERAARLRAEGDRAYEKHLNALHGTRQRLLVEKEGVARTEGFTLAAVDQGNA GEIIERIVTGHDGEKLLTRQAEPQAA
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=409, Percent_Identity=29.8288508557457, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI28872784, Length=444, Percent_Identity=24.7747747747748, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI28872782, Length=444, Percent_Identity=24.7747747747748, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1786882, Length=413, Percent_Identity=28.5714285714286, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1787057, Length=366, Percent_Identity=31.4207650273224, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17553146, Length=436, Percent_Identity=29.3577981651376, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI71996771, Length=345, Percent_Identity=27.536231884058, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI21356207, Length=378, Percent_Identity=26.7195767195767, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI19922432, Length=377, Percent_Identity=27.0557029177719, Blast_Score=133, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 47408; Mature: 47277
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEIVTFGCRLNTYESEVMRREADAAGLGTLKDGAIIFNTCAVTAEAVRQARQAIRKAR CCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH RENPDARIIVTGCAAQTEADNFAAMGEVDLVLGNEEKLKSNSYRMLPDFGVNQFEKVRVN HCCCCCEEEEEECCCCCCCCCEEECCCEEEEECCHHHHCCCCCEECCCCCCCHHHHHHHH DIMEVRETASHMVDAIEGRARAFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQVKR HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH LVGNGYAEVVLTGVDMTSYGPDLPSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEADEDL HHCCCEEEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHH MEAIASEKRLMPHLHLSLQAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIA HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCHHHC GFPTETEEMFQNSLKIVEECGLTHLHVFPYSPREGTPAARMPQVRREIVKERAARLRAEG CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHCCC DRAYEKHLNALHGTRQRLLVEKEGVARTEGFTLAAVDQGNAGEIIERIVTGHDGEKLLTR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHC QAEPQAA CCCCCCC >Mature Secondary Structure SVEIVTFGCRLNTYESEVMRREADAAGLGTLKDGAIIFNTCAVTAEAVRQARQAIRKAR CEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH RENPDARIIVTGCAAQTEADNFAAMGEVDLVLGNEEKLKSNSYRMLPDFGVNQFEKVRVN HCCCCCEEEEEECCCCCCCCCEEECCCEEEEECCHHHHCCCCCEECCCCCCCHHHHHHHH DIMEVRETASHMVDAIEGRARAFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQVKR HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH LVGNGYAEVVLTGVDMTSYGPDLPSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEADEDL HHCCCEEEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHH MEAIASEKRLMPHLHLSLQAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIA HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCHHHC GFPTETEEMFQNSLKIVEECGLTHLHVFPYSPREGTPAARMPQVRREIVKERAARLRAEG CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHCCC DRAYEKHLNALHGTRQRLLVEKEGVARTEGFTLAAVDQGNAGEIIERIVTGHDGEKLLTR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHC QAEPQAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]