Click here to switch to the map view.

The map label for this gene is rpmJ [H]

Identifier: 225853198

GI number: 225853198

Start: 1699966

End: 1700160

Strand: Direct

Name: rpmJ [H]

Synonym: BMEA_A1798

Alternate gene names: 225853198

Gene position: 1699966-1700160 (Clockwise)

Preceding gene: 225853197

Following gene: 225853199

Centisome position: 79.97

GC content: 57.95

Gene sequence:

>195_bases
TTGGGCGCCTGTTTTTATGACGCCCGGCGGCATCTTCATGTCGATGGGCCAACCAGACCGGTGATTGACATGAAGATCAA
GAACTCGCTCAAAGCCCTCAAGGCCCGTCATCGCGACTGCCAGCTGGTCCGCCGCAAGGGCCGCGTTTACATCATCAATA
AGACTGCCCCGCGCTTCAAGGCTCGTCAGGGCTAA

Upstream 100 bases:

>100_bases
GACCCTGAATCTGCGGCGCGGGAGTTGACATTTGCCTGAAACCTTGTGTATTTCGGCCAACCCTTCGGGCACCTGACCGT
GCCTGTAATCAATTGGCGCC

Downstream 100 bases:

>100_bases
TCTTATTTCTGATTTTGCATTTGACGTTTCGCTGCGCATGATTGAATCTATGCGCATGCGGAACGTTTTTGCATGTCTGT
CTGGCCTCTTTGTTGCCATG

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MGACFYDARRHLHVDGPTRPVIDMKIKNSLKALKARHRDCQLVRRKGRVYIINKTAPRFKARQG

Sequences:

>Translated_64_residues
MGACFYDARRHLHVDGPTRPVIDMKIKNSLKALKARHRDCQLVRRKGRVYIINKTAPRFKARQG
>Mature_63_residues
GACFYDARRHLHVDGPTRPVIDMKIKNSLKALKARHRDCQLVRRKGRVYIINKTAPRFKARQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000473 [H]

Pfam domain/function: PF00444 Ribosomal_L36 [H]

EC number: NA

Molecular weight: Translated: 7460; Mature: 7329

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGACFYDARRHLHVDGPTRPVIDMKIKNSLKALKARHRDCQLVRRKGRVYIINKTAPRFK
CCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCC
ARQG
CCCC
>Mature Secondary Structure 
GACFYDARRHLHVDGPTRPVIDMKIKNSLKALKARHRDCQLVRRKGRVYIINKTAPRFK
CCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCC
ARQG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA