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The map label for this gene is ychE [C]

Identifier: 225852601

GI number: 225852601

Start: 1092431

End: 1093060

Strand: Direct

Name: ychE [C]

Synonym: BMEA_A1145

Alternate gene names: 225852601

Gene position: 1092431-1093060 (Clockwise)

Preceding gene: 225852598

Following gene: 225852603

Centisome position: 51.39

GC content: 56.67

Gene sequence:

>630_bases
ATGGGGTTCTACGATACGGTTTTCAGCGCTTTCGTGACCCTCCTCGTCACAATCGATCTGCCAGGTCTGGCGCCGCTGTT
TCTGGCCATCACCCCCGGCATGAGCCGCCATGAGCGCGGACAGGTTGCGCTTCGCGCCTCGATCATCAGTTTCATCGTCA
TGGCGCTTTTTGCAATTGCGGGCGCGCAAATTCTCGGCATGTTCGGCATAACCATCGGCGCCTTCCGGGTGGCCGGTGGC
TTGCTCCTGTTCTGGATCGCATTTGAAATGATTTTCGAGAAGCGCACGGAACGTAAGGAAAAAAGCGCCGAGGTTGCCAT
AACCCGGGATCATATCCGCAATATAGCCGCCTTCCCGCTCGCCATTCCTCTGATTGCCGGGCCGGGCGCCATTTCGGCTA
TCGTGCTGACATCGGAATCGTTTCCTAGTGTTGGTTCGCGTGCCGCACTTCTCGGCGTTATTTTCGTTTGCCTGCTGATT
ACCTATTTTGTGCTGCTGCTCGCAGAACGGGTCGATCGTTTTCTGGGGGAAACAGGCCGCTCCATTCTCACCCGCCTTCT
CGGCGTCATCCTGGCAGCACTTGCCGTGCAGTTCGTCGCCGATGGTATCAAGACACTCATCATTGGTTAG

Upstream 100 bases:

>100_bases
TGTTCCCTATCGCTCTTTGCATCGACCCTGCGGCCTTCATGGTTTACATTTGCAGAAATGTGATCGGACAAATCAGACCA
ACAAAAGGGGCATGTGCAGG

Downstream 100 bases:

>100_bases
AGCGGTTCCGCTCTAAATCAATCGACTTCATTGCCTTCGTGCCGTGAAATGACGTTTGTATTATTTTATAAGAAACTCAA
AGAAACATAATTAAGCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGFYDTVFSAFVTLLVTIDLPGLAPLFLAITPGMSRHERGQVALRASIISFIVMALFAIAGAQILGMFGITIGAFRVAGG
LLLFWIAFEMIFEKRTERKEKSAEVAITRDHIRNIAAFPLAIPLIAGPGAISAIVLTSESFPSVGSRAALLGVIFVCLLI
TYFVLLLAERVDRFLGETGRSILTRLLGVILAALAVQFVADGIKTLIIG

Sequences:

>Translated_209_residues
MGFYDTVFSAFVTLLVTIDLPGLAPLFLAITPGMSRHERGQVALRASIISFIVMALFAIAGAQILGMFGITIGAFRVAGG
LLLFWIAFEMIFEKRTERKEKSAEVAITRDHIRNIAAFPLAIPLIAGPGAISAIVLTSESFPSVGSRAALLGVIFVCLLI
TYFVLLLAERVDRFLGETGRSILTRLLGVILAALAVQFVADGIKTLIIG
>Mature_208_residues
GFYDTVFSAFVTLLVTIDLPGLAPLFLAITPGMSRHERGQVALRASIISFIVMALFAIAGAQILGMFGITIGAFRVAGGL
LLFWIAFEMIFEKRTERKEKSAEVAITRDHIRNIAAFPLAIPLIAGPGAISAIVLTSESFPSVGSRAALLGVIFVCLLIT
YFVLLLAERVDRFLGETGRSILTRLLGVILAALAVQFVADGIKTLIIG

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=209, Percent_Identity=32.0574162679426, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1787809, Length=193, Percent_Identity=31.6062176165803, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789842, Length=209, Percent_Identity=31.1004784688995, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22396; Mature: 22265

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFYDTVFSAFVTLLVTIDLPGLAPLFLAITPGMSRHERGQVALRASIISFIVMALFAIA
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAQILGMFGITIGAFRVAGGLLLFWIAFEMIFEKRTERKEKSAEVAITRDHIRNIAAFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
AIPLIAGPGAISAIVLTSESFPSVGSRAALLGVIFVCLLITYFVLLLAERVDRFLGETGR
HHHHHCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILTRLLGVILAALAVQFVADGIKTLIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GFYDTVFSAFVTLLVTIDLPGLAPLFLAITPGMSRHERGQVALRASIISFIVMALFAIA
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAQILGMFGITIGAFRVAGGLLLFWIAFEMIFEKRTERKEKSAEVAITRDHIRNIAAFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
AIPLIAGPGAISAIVLTSESFPSVGSRAALLGVIFVCLLITYFVLLLAERVDRFLGETGR
HHHHHCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILTRLLGVILAALAVQFVADGIKTLIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]