Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 225852540

GI number: 225852540

Start: 1020695

End: 1021111

Strand: Direct

Name: dksA [H]

Synonym: BMEA_A1077

Alternate gene names: 225852540

Gene position: 1020695-1021111 (Clockwise)

Preceding gene: 225852535

Following gene: 225852542

Centisome position: 48.02

GC content: 52.04

Gene sequence:

>417_bases
ATGAGTGAATTAATTGACCTTGACTATAGGCCCACTGAAGACGAACCGTTCATGAATGAACGGCAGAAGTCTTATTTCCG
TGCAAAACTGGTTGCATGGAAGAATGATATTCTGCGTGAAGCGCGCGAAACGCTTGATGCGCTCCAGCAGGAAAACGCAA
ACCATCCCGACCTGGCGGATAGGGCTTCCTCCGAAACGGATCGGGCAATCGAGCTTCGTGCTCGTGACAGACAGCGCAAG
CTGATCTCCAAGATCGATGCTGCATTGAGCCGTTTGGATGATGGCACTTATGGTTTCTGCGAGGAAACCGGCGACCCCAT
CAGCCTGAAGCGTCTTGATGCCCGTCCGATCGCAACACTTTCGATTGAAGCGCAAGAACGCCATGAGCGTCGTGAAAAGG
TTTATCGCGACGACTGA

Upstream 100 bases:

>100_bases
ATGCACTAAAAAGTAGTGGGACATGATTGTTTGATGTTGTGTCATAGATACGATGGACTTATATAACCGCACGCGTCTCC
TAGATGTGGGGTGATTCAGA

Downstream 100 bases:

>100_bases
TATCGAATAATGGTTTGGAAATTTACAAAGGCTGCGCCTCAAGCGCAGCCTTTCGTTTATCTGGAGAATAATCCGACCGG
AGTGGAAATGCGACAAAACA

Product: RNA polymerase-binding protein DksA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSELIDLDYRPTEDEPFMNERQKSYFRAKLVAWKNDILREARETLDALQQENANHPDLADRASSETDRAIELRARDRQRK
LISKIDAALSRLDDGTYGFCEETGDPISLKRLDARPIATLSIEAQERHERREKVYRDD

Sequences:

>Translated_138_residues
MSELIDLDYRPTEDEPFMNERQKSYFRAKLVAWKNDILREARETLDALQQENANHPDLADRASSETDRAIELRARDRQRK
LISKIDAALSRLDDGTYGFCEETGDPISLKRLDARPIATLSIEAQERHERREKVYRDD
>Mature_137_residues
SELIDLDYRPTEDEPFMNERQKSYFRAKLVAWKNDILREARETLDALQQENANHPDLADRASSETDRAIELRARDRQRKL
ISKIDAALSRLDDGTYGFCEETGDPISLKRLDARPIATLSIEAQERHERREKVYRDD

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=125, Percent_Identity=44, Blast_Score=106, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16165; Mature: 16034

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELIDLDYRPTEDEPFMNERQKSYFRAKLVAWKNDILREARETLDALQQENANHPDLAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
RASSETDRAIELRARDRQRKLISKIDAALSRLDDGTYGFCEETGDPISLKRLDARPIATL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCCEEE
SIEAQERHERREKVYRDD
ECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SELIDLDYRPTEDEPFMNERQKSYFRAKLVAWKNDILREARETLDALQQENANHPDLAD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
RASSETDRAIELRARDRQRKLISKIDAALSRLDDGTYGFCEETGDPISLKRLDARPIATL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCCEEE
SIEAQERHERREKVYRDD
ECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]