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The map label for this gene is 225852333

Identifier: 225852333

GI number: 225852333

Start: 816602

End: 818278

Strand: Direct

Name: 225852333

Synonym: BMEA_A0859

Alternate gene names: NA

Gene position: 816602-818278 (Clockwise)

Preceding gene: 225852332

Following gene: 225852334

Centisome position: 38.42

GC content: 59.75

Gene sequence:

>1677_bases
ATGGCCCGGTCCAATACTACGGAATTCGTCTTTCTGCCGCTCGGCGGTGTAGGCGAAATCGGCATGAATTTGGCCATGTA
TGGTTTTGGTCCTGCGGATAACCGCGAATGGCTGGTCGTGGATATGGGGGTCAGCTTTGCCGGGCCGGAACAGCCGGGCG
CCGACCTCATTCTGCCGGATATTCGCTATCTCGAAGCTGAAAAGCACAATCTGCGCGGCATTGTCATCACCCATGCGCAT
GAAGATCATTTTGGTGCGCTGCTTGATCTTTGGCCGCGCCTGAAAGTTCCCGTCTATGCGACGCCGTTCATAGCTGGTCT
GCTGGAAGCCAAGCGCCAGTCGGAAGACAGTGCGCCGGAAATTCCGATCACGATCTATAAGGCCGGCGAGACGTTTGAAG
TCGGCCCGTTCAAGATTGAAGCCGTCGCTGTCACCCATTCGATTCCGGAGCCGGTTTCGCTGGCCATCACCACGCCGCTT
GGCACGGTGGTGCATACGGGCGACTGGAAAATGGATCCCGAGCCATCGCTTGGCCCCGTCATTGACGAAGCGCGCTTTCG
CGCCATAGGTGAGGCCGGTGTTCTGGCGCTGATCTGCGACTCTACCAATGCGCTGCGTGAAGGTGAGTCCCCATCGGAGC
GCCAGGTGGGTGAAAGTCTGCGCGAACTGATCCAGAATGCGCGCGGACGTGTGGCGATCACAACTTTTTCCTCCAATGTG
GGGCGTATCCGTTCGATCACGGAAGCTGCCCGCGATGCGGGCCGGCAGGTTCTGGTGGTGGGGCGTTCGATGAAGCGCGC
CATCTCGGTTGCAACCGAACTTGGTTATATGGAAGGCCTGCCGGAATATCTCAGCGAAGAGGATTACGGCTACATTCCGC
GTGAAAATGTGGTGATGATCCTGACCGGCAGTCAGGGCGAACCGCGCGCGGCACTGGCGAAACTTGCCCGCGATGAGATG
CGCAGCCTCGCCCTGACGGCGGGTGATACGGTCATCTATTCGTCGCGGGCCATTCCCGGCAACGAAAAGGCCATTCTCGA
CATCAAGAACCGGCTGATCGATCGCGGTATCAAGATCATTGGCGATGAGGACGCCCTCGTTCACGTTTCAGGCCATCCGC
GCCGCAGTGAGTTGCGCCGCATGTATTCCTGGGTTCGTCCGCAGATTCTCGTGCCGGTGCATGGCGAGGCCGCTCATCTG
GTCGCGCAAGGGTCTCTGGGTGCGATGGAGGGCATCGAGCAGATCGCACAGGTACGTGACGGCGACATGCTGCGCCTTGC
GCCCGGCAAGGCCGAGATCATTGACGAAGCGCCAGTGGGCCGCCTCTACAAGGACGGCAAGCTGATCGGCGACGAAGAAG
AAATCGGTATGGTGGAGCGGCGCAAGCTCGCCTATGTCGGCCATGTCGCGGTATCGGTTCTGCTCGACCGGGAGCACAAG
ATGCTGGACGAACCTGACCTTGTGGCCTTCGGCCTGCCTGAGGAGGACAGGCAGGGTGAACTGATGGAAGACATTCTGCT
GGATGCAGCCATTGAGGCGATCGACAGCATACCGCGCGTTCGCCGCAAGGATATTGAGACGGTGCGCGAGTCTGTTCGCC
GCGCCGTCCGGGCTGCGGCAAATGAAGCCTGGGGCAAAAAGCCGGTAGTGACCGTCTTCGTGAATAGGATACGGTAA

Upstream 100 bases:

>100_bases
GTTTTGCGTCGGATAATGCGACAAACAAATAGTTAGAGCGGTTTCGGCGATTCCGTTAAAACGGGAACCGCTCTAAAGAA
TTGATCACAAAGGAAGTTTC

Downstream 100 bases:

>100_bases
TCCTGCGAAATTGCGAACTGACTGGCATGGGAGGTGCTTATGCTTGAACGCTTGAACCATGTGGCGATAGCCGTTCCCGA
TCTTGAAGCCGCAACCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYLEAEKHNLRGIVITHAH
EDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPEIPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPL
GTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGSQGEPRAALAKLARDEM
RSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHL
VAQGSLGAMEGIEQIAQVRDGDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEAWGKKPVVTVFVNRIR

Sequences:

>Translated_558_residues
MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYLEAEKHNLRGIVITHAH
EDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPEIPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPL
GTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGSQGEPRAALAKLARDEM
RSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHL
VAQGSLGAMEGIEQIAQVRDGDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEAWGKKPVVTVFVNRIR
>Mature_557_residues
ARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYLEAEKHNLRGIVITHAHE
DHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPEIPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLG
TVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVG
RIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGSQGEPRAALAKLARDEMR
SLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLV
AQGSLGAMEGIEQIAQVRDGDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKM
LDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEAWGKKPVVTVFVNRIR

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 61215; Mature: 61084

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
CCCCCCCCEEEEECCCCCHHCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEECCC
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPE
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEECHHHHHHHHHHHCCCCCCCC
IPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
CCEEEEECCCEEECCCEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCH
IDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
HHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEE
LTGSQGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII
EECCCCCCHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEE
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRD
CCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCC
GDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
CCEEEECCCCHHHCCCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHCCHHH
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAA
HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEAWGKKPVVTVFVNRIR
HHHCCCCCEEEEEEECCC
>Mature Secondary Structure 
ARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
CCCCCCCEEEEECCCCCHHCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEECCC
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPE
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEECHHHHHHHHHHHCCCCCCCC
IPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
CCEEEEECCCEEECCCEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCH
IDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
HHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEE
LTGSQGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII
EECCCCCCHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEE
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRD
CCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCC
GDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
CCEEEECCCCHHHCCCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHCCHHH
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAA
HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEAWGKKPVVTVFVNRIR
HHHCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]