Click here to switch to the map view.

The map label for this gene is glxA [H]

Identifier: 225851853

GI number: 225851853

Start: 340544

End: 341560

Strand: Direct

Name: glxA [H]

Synonym: BMEA_A0344

Alternate gene names: 225851853

Gene position: 340544-341560 (Clockwise)

Preceding gene: 225851852

Following gene: 225851854

Centisome position: 16.02

GC content: 59.98

Gene sequence:

>1017_bases
GTGTCGGTGGTGAATGAAACGGGAAGGGACCTCGGCGGAAAGGCGGAAGCGACGGCTGATGTGCCGCCGCGCCGGCTGTC
GGTGGGCATCGTCGTGTTGCCCGGATTTACCTTGTCTGCGCTCAGCCTTTTTCTCGATCCGTTTCGTCTGGCAGCCGACG
ACCGCGACAAAAGCCGCCAGATACGCTGCGCGTGGAAAATATGCACACTCTCCGGCGATCCCGTCACGTCCAGTTCCGGC
ATGGTGATTGAGCCGACGGTGCCTCTTGGCGAAATTGATGAATGCGATTATGTGGCGGTTGTGGGCGGGCTTCTGGCGCA
ATATCGCCATAGCCAGCAGGCCCTGATCGATCTCATCAAGCGGGCCGACAAGCGCGGCAAGGCGGTGGTTGGCCTTTGCA
CGGCGGCTTTTCTTCTGGCGGAAGCGGGTGTGCTCGAAGACCGCAATTGCTGCGTGAGCTGGTTTCATCGCGATGATTTC
CTTGAGCTTTTCGACGGCTATACTGCCGATACGACAAGCCTTTTCCATCTTAGCGGGCGGCATTATACCTGTGCTGGCGG
CCTTGGCGCTGCCGCGCTGGCGCTATCGATCATCCAGAACGAAATTTCGGAAGAACTGGCGCGCAAAAGCGCATCCATCC
TGCTCATCCCCTATGAGCTGGTGCGCTTGGAACAGCCGGCCTTGAGCTTCAATGGCGTGCGTTCGCCGATGATCCGCAAG
GCAATCCGCATTTTCGAGGAAACGCTGGAAGATCCGGTGCCGATGATCGATGTCGCGCGCAGGCTCGGCATTTCCGTTCG
CCAGATGGAGCGCGGCTTCCGGCTTTCGCTGGGGCGCACGGCTTTCGAGGTGCGCGAGGAATTGCGGGTCAAGAAGGCGA
AGGAGCTTCTGGCCGAAACCAGCCTGTCCCTGCTTGAAGTGGCGGTTGCCAGCGGCTTCACTGATACGCGCAGCATGAAC
CGTTCCTTTTCGCGTCAAAAGCAGAAAGCCCCGCGCGACTATCGCAGGCAGCGCTGA

Upstream 100 bases:

>100_bases
TTTCCGCTGATCGCGAAGCCTTTCCGGCGCAGGATGCAGCGGTTTTGCCGGGAATGCTCAGGCTGCTTCTGCGGTGATAG
GATGCGGATGGAGGAGGGCG

Downstream 100 bases:

>100_bases
ATTTTGGTAACGCACAGGCAAAACTTGCGGATTTGGCGGCGACCGTCTATTTCTTGCACCATAAAAGCAAGCCGCAGGAG
ATTTGCATGTCGGATGGTGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSVVNETGRDLGGKAEATADVPPRRLSVGIVVLPGFTLSALSLFLDPFRLAADDRDKSRQIRCAWKICTLSGDPVTSSSG
MVIEPTVPLGEIDECDYVAVVGGLLAQYRHSQQALIDLIKRADKRGKAVVGLCTAAFLLAEAGVLEDRNCCVSWFHRDDF
LELFDGYTADTTSLFHLSGRHYTCAGGLGAAALALSIIQNEISEELARKSASILLIPYELVRLEQPALSFNGVRSPMIRK
AIRIFEETLEDPVPMIDVARRLGISVRQMERGFRLSLGRTAFEVREELRVKKAKELLAETSLSLLEVAVASGFTDTRSMN
RSFSRQKQKAPRDYRRQR

Sequences:

>Translated_338_residues
MSVVNETGRDLGGKAEATADVPPRRLSVGIVVLPGFTLSALSLFLDPFRLAADDRDKSRQIRCAWKICTLSGDPVTSSSG
MVIEPTVPLGEIDECDYVAVVGGLLAQYRHSQQALIDLIKRADKRGKAVVGLCTAAFLLAEAGVLEDRNCCVSWFHRDDF
LELFDGYTADTTSLFHLSGRHYTCAGGLGAAALALSIIQNEISEELARKSASILLIPYELVRLEQPALSFNGVRSPMIRK
AIRIFEETLEDPVPMIDVARRLGISVRQMERGFRLSLGRTAFEVREELRVKKAKELLAETSLSLLEVAVASGFTDTRSMN
RSFSRQKQKAPRDYRRQR
>Mature_337_residues
SVVNETGRDLGGKAEATADVPPRRLSVGIVVLPGFTLSALSLFLDPFRLAADDRDKSRQIRCAWKICTLSGDPVTSSSGM
VIEPTVPLGEIDECDYVAVVGGLLAQYRHSQQALIDLIKRADKRGKAVVGLCTAAFLLAEAGVLEDRNCCVSWFHRDDFL
ELFDGYTADTTSLFHLSGRHYTCAGGLGAAALALSIIQNEISEELARKSASILLIPYELVRLEQPALSFNGVRSPMIRKA
IRIFEETLEDPVPMIDVARRLGISVRQMERGFRLSLGRTAFEVREELRVKKAKELLAETSLSLLEVAVASGFTDTRSMNR
SFSRQKQKAPRDYRRQR

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37362; Mature: 37231

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVNETGRDLGGKAEATADVPPRRLSVGIVVLPGFTLSALSLFLDPFRLAADDRDKSRQ
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCE
IRCAWKICTLSGDPVTSSSGMVIEPTVPLGEIDECDYVAVVGGLLAQYRHSQQALIDLIK
EEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RADKRGKAVVGLCTAAFLLAEAGVLEDRNCCVSWFHRDDFLELFDGYTADTTSLFHLSGR
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
HYTCAGGLGAAALALSIIQNEISEELARKSASILLIPYELVRLEQPALSFNGVRSPMIRK
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHH
AIRIFEETLEDPVPMIDVARRLGISVRQMERGFRLSLGRTAFEVREELRVKKAKELLAET
HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
SLSLLEVAVASGFTDTRSMNRSFSRQKQKAPRDYRRQR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
SVVNETGRDLGGKAEATADVPPRRLSVGIVVLPGFTLSALSLFLDPFRLAADDRDKSRQ
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCE
IRCAWKICTLSGDPVTSSSGMVIEPTVPLGEIDECDYVAVVGGLLAQYRHSQQALIDLIK
EEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RADKRGKAVVGLCTAAFLLAEAGVLEDRNCCVSWFHRDDFLELFDGYTADTTSLFHLSGR
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
HYTCAGGLGAAALALSIIQNEISEELARKSASILLIPYELVRLEQPALSFNGVRSPMIRK
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHH
AIRIFEETLEDPVPMIDVARRLGISVRQMERGFRLSLGRTAFEVREELRVKKAKELLAET
HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
SLSLLEVAVASGFTDTRSMNRSFSRQKQKAPRDYRRQR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]