| Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_012441 |
| Length | 2,125,701 |
Click here to switch to the map view.
The map label for this gene is dcd [C]
Identifier: 225851852
GI number: 225851852
Start: 339362
End: 340453
Strand: Direct
Name: dcd [C]
Synonym: BMEA_A0343
Alternate gene names: 225851852
Gene position: 339362-340453 (Clockwise)
Preceding gene: 225851849
Following gene: 225851853
Centisome position: 15.96
GC content: 60.99
Gene sequence:
>1092_bases ATGACGCAAAGGGACGCAGGAATTCTGGCGGATGCGGATATTGCCGCGCTGTTTGAGAGCGGTTTGCTGGCTTCGCCCCG CCTGCTGGATGCCGATCAGATTCAGCCTGCAAGCCTTGACTTGCGCCTTGGCGCCAAGGCCTATCGGGTGCGCGCTTCCT TTATGCCGGGGCCGGGCACACCGGTCATCGACAAGCTGGAGCGGCTGAAACTGCATGAAATCGACCTGACGGCGGGCGCG GTTCTGGAAACGGGCTGCGTCTATATCGTCCCGCTTCTGGAAAGCCTTGCGCTCTCGCCGGAGCTTTCTGCTTCCGCCAA TCCGAAAAGCTCGACCGGACGGCTCGATATCTTCACGCGCGTCATCGCTGACGGTGCGCAGGAATTTGACAAGGTTCCCG CCGGTTACAAGGGGCCGCTCTATCTGGAAGTGAGCCCGCGCACCTTCCCCATCGTCGTGCGCACCGGCTCGCGCCTGTCG CAGATCCGTTTCCGCAAGGGCCGCGCGCAGCTTGATGAAAGCGAACTTGGGGTGCTCCATAAGGCCGAAACGCTGGTCGC ATCCGAAATGCCCAATATTTCCGGCGGCGGCATTGCGCTCTCGGTCGATCTTTCCGGCGGCGAGGACAGGCTGATCGGCT ATCGCGGCAAGCACCACACCGGCGTCGTCGATGTGGACAAGCGCGCAGCCCATGATGTGCTCGACTTCTGGGAGCCGCTT TATGATCGCGGTGCCCATGAACTCGTGCTCGACCCGGATGAATTCTATATCCTTGTTTCCCGCGAGGCGGTGCATGTGCC ACCGCTCTATGCGGCGGAAATGACGCCTTTCGATCCGCTGGTCGGCGAATTTCGCGTGCATTATGCCGGTTTCTTCGATC CGGGCTTCGGCCACAGTGCTGCGGGCGGCACCGGCAGCCGTGCCGTGCTGGAAGTGCGCAGCCATGAAGTCCCCTTCATT CTGGAACATGGCCAGATCGTCGGGCGCCTCGTCTATGAACATATGCTGGGCCAGCCGAAGGCGCTTTACGGCATCGACCT TGGCTCCAATTATCAGGCCCAGCAATTGAAGCTTTCCAAGCATTTCCGCTGA
Upstream 100 bases:
>100_bases GGAAAACCCGACAAACAGGGGAGCGCAAGCCGCCCGATTGATGCTAAGAGCATTCAATTATCTAAAGATTATGGCGCGGC AGGCGACGGAGTACAGGTTG
Downstream 100 bases:
>100_bases TCGCGAAGCCTTTCCGGCGCAGGATGCAGCGGTTTTGCCGGGAATGCTCAGGCTGCTTCTGCGGTGATAGGATGCGGATG GAGGAGGGCGGTGTCGGTGG
Product: 2'-deoxycytidine 5'-triphosphate deaminase
Products: dUTP; NH3
Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTQRDAGILADADIAALFESGLLASPRLLDADQIQPASLDLRLGAKAYRVRASFMPGPGTPVIDKLERLKLHEIDLTAGA VLETGCVYIVPLLESLALSPELSASANPKSSTGRLDIFTRVIADGAQEFDKVPAGYKGPLYLEVSPRTFPIVVRTGSRLS QIRFRKGRAQLDESELGVLHKAETLVASEMPNISGGGIALSVDLSGGEDRLIGYRGKHHTGVVDVDKRAAHDVLDFWEPL YDRGAHELVLDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSAAGGTGSRAVLEVRSHEVPFI LEHGQIVGRLVYEHMLGQPKALYGIDLGSNYQAQQLKLSKHFR
Sequences:
>Translated_363_residues MTQRDAGILADADIAALFESGLLASPRLLDADQIQPASLDLRLGAKAYRVRASFMPGPGTPVIDKLERLKLHEIDLTAGA VLETGCVYIVPLLESLALSPELSASANPKSSTGRLDIFTRVIADGAQEFDKVPAGYKGPLYLEVSPRTFPIVVRTGSRLS QIRFRKGRAQLDESELGVLHKAETLVASEMPNISGGGIALSVDLSGGEDRLIGYRGKHHTGVVDVDKRAAHDVLDFWEPL YDRGAHELVLDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSAAGGTGSRAVLEVRSHEVPFI LEHGQIVGRLVYEHMLGQPKALYGIDLGSNYQAQQLKLSKHFR >Mature_362_residues TQRDAGILADADIAALFESGLLASPRLLDADQIQPASLDLRLGAKAYRVRASFMPGPGTPVIDKLERLKLHEIDLTAGAV LETGCVYIVPLLESLALSPELSASANPKSSTGRLDIFTRVIADGAQEFDKVPAGYKGPLYLEVSPRTFPIVVRTGSRLSQ IRFRKGRAQLDESELGVLHKAETLVASEMPNISGGGIALSVDLSGGEDRLIGYRGKHHTGVVDVDKRAAHDVLDFWEPLY DRGAHELVLDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSAAGGTGSRAVLEVRSHEVPFIL EHGQIVGRLVYEHMLGQPKALYGIDLGSNYQAQQLKLSKHFR
Specific function: De novo synthesis of thymidylate. [C]
COG id: COG0717
COG function: function code F; Deoxycytidine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.4.13
Molecular weight: Translated: 39527; Mature: 39395
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRDAGILADADIAALFESGLLASPRLLDADQIQPASLDLRLGAKAYRVRASFMPGPGT CCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCC PVIDKLERLKLHEIDLTAGAVLETGCVYIVPLLESLALSPELSASANPKSSTGRLDIFTR HHHHHHHHCEEEEEECCCCHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH VIADGAQEFDKVPAGYKGPLYLEVSPRTFPIVVRTGSRLSQIRFRKGRAQLDESELGVLH HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHCHHH KAETLVASEMPNISGGGIALSVDLSGGEDRLIGYRGKHHTGVVDVDKRAAHDVLDFWEPL HHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHH YDRGAHELVLDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSA HHCCCCEEEECCCCEEEEEECCEEECCCCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCC AGGTGSRAVLEVRSHEVPFILEHGQIVGRLVYEHMLGQPKALYGIDLGSNYQAQQLKLSK CCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH HFR CCC >Mature Secondary Structure TQRDAGILADADIAALFESGLLASPRLLDADQIQPASLDLRLGAKAYRVRASFMPGPGT CCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCC PVIDKLERLKLHEIDLTAGAVLETGCVYIVPLLESLALSPELSASANPKSSTGRLDIFTR HHHHHHHHCEEEEEECCCCHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH VIADGAQEFDKVPAGYKGPLYLEVSPRTFPIVVRTGSRLSQIRFRKGRAQLDESELGVLH HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHCHHH KAETLVASEMPNISGGGIALSVDLSGGEDRLIGYRGKHHTGVVDVDKRAAHDVLDFWEPL HHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHH YDRGAHELVLDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSA HHCCCCEEEECCCCEEEEEECCEEECCCCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCC AGGTGSRAVLEVRSHEVPFILEHGQIVGRLVYEHMLGQPKALYGIDLGSNYQAQQLKLSK CCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH HFR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dCTP; H2O
Specific reaction: dCTP + H2O = dUTP + NH3
General reaction: Amidine hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA