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The map label for this gene is ccmC [H]

Identifier: 225851635

GI number: 225851635

Start: 101466

End: 102251

Strand: Direct

Name: ccmC [H]

Synonym: BMEA_A0101

Alternate gene names: 225851635

Gene position: 101466-102251 (Clockwise)

Preceding gene: 225851634

Following gene: 225851636

Centisome position: 4.77

GC content: 58.52

Gene sequence:

>786_bases
ATGAAAGACGCCGCAAAAACTGCAAGCTGGCTTGATCTGGCCAATCCCACACGCTTCCTTGCCTTTGCGGGCAGGGTTGT
GCCCTGGCTTGGGCTGGCATCGGCAATCTTTCTTGCTGTCGGGCTTTACATGGTTTTCCTGTCGCCGGACGATTATCAGC
AGGGCAGCACGGTGCGCATCATGTATATTCATGTGCCTTTCGCGTGGCTCTCCATGATGTGCTATTCGATCATGGCTGTT
TCCTCGCTTGGCACACTGGTCTGGCGGCACCCGCTGGCCGATGTTTCGGTGCGTGCCGCGGCTCCCATCGGCGCGGTGTT
CACGGCACTGGCGCTTGCCACCGGCTCGCTATGGGGCAAGCCCATGTGGGGAACATGGTGGGTATGGGATGCGCGGCTCA
CCTCGGTTTTTGTCCTCTTTCTCATGTATCTCGGCATTATTGCGCTCTCGCGCGCCATGGATGACCCGGCAAGAAGCGCA
AAGCCCGTAGCAGTGCTCACGCTCGTCGGCTTCATCAATGTGCCGATCATCAAATTCTCGGTCGATTGGTGGAATACGCT
GCATCAGCCTGCTTCCGTATTTCGTCTCGACGGCCCAACCATCGACGGCTCCATGCTGCGCCCGCTTTTCGTGATGGCTA
TCGGCTTCACGCTTTTGTTCTTCACGCTGCATATGATGGCGATGCGTAATGAAATCTGGCGCCGCCGCGTGGCGTCGATG
AAAAAACTGGCGGCTCGCAATGTGGACCGCAATCGCGCCGGGCAGGTGGAGGAGGGCGCGCTATGA

Upstream 100 bases:

>100_bases
TCCGTTGGCGGCCAGTGCCGCACTGAAAAATTCGGCGGATTGACGCAGTTGATTGCGGTCAATTGAACGATATCGGGGGT
AAAGCTAAATATAGACCATG

Downstream 100 bases:

>100_bases
GCAATCATTTGGGCTTCATCATCGCTTCCTACGGCATCACGGTTGCCGCACTTGCCGTCACCATCGGCTGGATATTGATT
GACCAGCGCATCCAGAAAAA

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycZ [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKDAAKTASWLDLANPTRFLAFAGRVVPWLGLASAIFLAVGLYMVFLSPDDYQQGSTVRIMYIHVPFAWLSMMCYSIMAV
SSLGTLVWRHPLADVSVRAAAPIGAVFTALALATGSLWGKPMWGTWWVWDARLTSVFVLFLMYLGIIALSRAMDDPARSA
KPVAVLTLVGFINVPIIKFSVDWWNTLHQPASVFRLDGPTIDGSMLRPLFVMAIGFTLLFFTLHMMAMRNEIWRRRVASM
KKLAARNVDRNRAGQVEEGAL

Sequences:

>Translated_261_residues
MKDAAKTASWLDLANPTRFLAFAGRVVPWLGLASAIFLAVGLYMVFLSPDDYQQGSTVRIMYIHVPFAWLSMMCYSIMAV
SSLGTLVWRHPLADVSVRAAAPIGAVFTALALATGSLWGKPMWGTWWVWDARLTSVFVLFLMYLGIIALSRAMDDPARSA
KPVAVLTLVGFINVPIIKFSVDWWNTLHQPASVFRLDGPTIDGSMLRPLFVMAIGFTLLFFTLHMMAMRNEIWRRRVASM
KKLAARNVDRNRAGQVEEGAL
>Mature_261_residues
MKDAAKTASWLDLANPTRFLAFAGRVVPWLGLASAIFLAVGLYMVFLSPDDYQQGSTVRIMYIHVPFAWLSMMCYSIMAV
SSLGTLVWRHPLADVSVRAAAPIGAVFTALALATGSLWGKPMWGTWWVWDARLTSVFVLFLMYLGIIALSRAMDDPARSA
KPVAVLTLVGFINVPIIKFSVDWWNTLHQPASVFRLDGPTIDGSMLRPLFVMAIGFTLLFFTLHMMAMRNEIWRRRVASM
KKLAARNVDRNRAGQVEEGAL

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=222, Percent_Identity=50.4504504504504, Blast_Score=207, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 29088; Mature: 29088

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDAAKTASWLDLANPTRFLAFAGRVVPWLGLASAIFLAVGLYMVFLSPDDYQQGSTVRI
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
MYIHVPFAWLSMMCYSIMAVSSLGTLVWRHPLADVSVRAAAPIGAVFTALALATGSLWGK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC
PMWGTWWVWDARLTSVFVLFLMYLGIIALSRAMDDPARSAKPVAVLTLVGFINVPIIKFS
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VDWWNTLHQPASVFRLDGPTIDGSMLRPLFVMAIGFTLLFFTLHMMAMRNEIWRRRVASM
HHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLAARNVDRNRAGQVEEGAL
HHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDAAKTASWLDLANPTRFLAFAGRVVPWLGLASAIFLAVGLYMVFLSPDDYQQGSTVRI
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
MYIHVPFAWLSMMCYSIMAVSSLGTLVWRHPLADVSVRAAAPIGAVFTALALATGSLWGK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC
PMWGTWWVWDARLTSVFVLFLMYLGIIALSRAMDDPARSAKPVAVLTLVGFINVPIIKFS
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VDWWNTLHQPASVFRLDGPTIDGSMLRPLFVMAIGFTLLFFTLHMMAMRNEIWRRRVASM
HHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLAARNVDRNRAGQVEEGAL
HHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]