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The map label for this gene is yliB [C]

Identifier: 225686847

GI number: 225686847

Start: 1059184

End: 1060728

Strand: Reverse

Name: yliB [C]

Synonym: BMEA_B1086

Alternate gene names: 225686847

Gene position: 1060728-1059184 (Counterclockwise)

Preceding gene: 225686848

Following gene: 225686846

Centisome position: 89.47

GC content: 54.37

Gene sequence:

>1545_bases
ATGACAATTCGCACCTTGTTCAATGCCATCCTGTTGTCGACGACGCTGCTCGCAGCCCCCTCTCTGGCGGAAACGCCGAA
AGAAGGCGGCACATTGGTTTATGCCAGCAATGCCGGCCCCGGCACACTGGACCCGCATATGGGCAACTCGCTGGTGGAAC
TGGAAATCGCCCATCAGATCTATGAGGGCCTGGTCACAATCGACGCTAATTATAATACCGCGACAATGCTCGCTGAAAGC
TATGTCCTCAGCGAAGACGGCAAGACGCTGACCTTCAAGCTGCGCAAGGGCGTCAAATTTCATGACGGCTCCGACATGAA
ATCGGACGACGTGCTCGCGAGCTTCGAGCGCTATGCAAAAGTGAGCCCTAACGCCAAGGTTCTCGACATTGTCGACCATT
ATGAAACCCCGGATGATTACACCTTCGTCATTCATCTCAAGGAGGTGAATGCAGCGTTTCTCGACACGTTGAAAAGCCCC
GTCTATCCCTTCTCGATCATCCCGGCAGAACAAAAGGACAAGCCCGCGCGCGAACTCGACATCATCGGCACGGGCCCTTT
CAAGCTCGGCGAATGGAAGCGTGACAGCCACCTCTATCTGGAGAAATTCGCCGACTATGTTGCCGATAAAGGCAAACCCG
CCTCCGGTTATGCAGGCGAGAAAAAGGTTTATGTCGACAAGGTTCGGGTGAACTTTCTCAGCGAAACCAATTCGCGTGTT
GCAGCGATCCAGACCGGCGAAGCACAGGTCACAACCCAATTGACCGCCGATGCCACCAAGAAGCTGCAAAACGCGCCCGG
TGTGAAGCCGCTCGAGATCATTCCCTTCTGCCAGCAATATCTGATCGTCAATACGCAACAGGCTCCGACCAATAATTCCG
CGATCCGCAAGGCCTTGCGAACGGCGGTGAATGCCGAGGATATTCTCGTCGTCAGCGGCGAAGCCGCCACCATGGACCCA
TCCATGTCCTATCCGGGTGGCGCCTATTATTCGAAGGAAAATGCCGAGCCTTATTACAATCAGAACAACCCGGACGAAGC
CGCCAAAATGCTGGCCGATGCCGGACATAAAGGGGAAGAACTCGTTCTCCTGACCAATTCCAATTACGACTATATGCGTG
ACAACATCGTTCTTCTTGCCGAACAGCTTCAGGCGGCGGGCTTCAAGGCCCGCGTGGAAATGACCGATTGGGCCACCAAT
TCCACCGCCATGCAGACAGGCTCCGGCAAATGGAACGTCTCGACCACATCCTTCTGTTCCAACCCGCTTCTGGGGCCGCA
GCAATGGCAGTCGGTCGTCTATCTCTTCCCGCAGGTCAAGTCGGACGCGCTGATGGACACGGCTTATAAAAAATTCTTCA
CCTCCCTGAAACTGGAGGATCGTCGCGCAGCCTGGCTCGATATCGAAAAGCACATTCTTGACGAAGCCTACATGATCAAA
ATCTCCAATTGCGCTTCAGGCCGCGCCTATCGTCCCGACGATATCGGCGGTTATCCGGAATATTACATGAACTTCTTCTG
GAACGTCTGGCTGAAGAAACAGTAG

Upstream 100 bases:

>100_bases
GAACAGGTGCCGGCCTGCTATTCACGTGAAAACGTCAGGGCCAACAGCGCCAGGCACCTGATTATGCAGCCATCTTAACA
CAGAAATCGGGGAGGAAATC

Downstream 100 bases:

>100_bases
GGCGGGTCCCGTTTCGTCAAAAAGGCGAAGCCGCTCTCGCCATTGGTCCCTATGCCGTTTCGAACCGGGGCCGGTTCACA
TTTCCGGTTCGAAATGGCTC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MTIRTLFNAILLSTTLLAAPSLAETPKEGGTLVYASNAGPGTLDPHMGNSLVELEIAHQIYEGLVTIDANYNTATMLAES
YVLSEDGKTLTFKLRKGVKFHDGSDMKSDDVLASFERYAKVSPNAKVLDIVDHYETPDDYTFVIHLKEVNAAFLDTLKSP
VYPFSIIPAEQKDKPARELDIIGTGPFKLGEWKRDSHLYLEKFADYVADKGKPASGYAGEKKVYVDKVRVNFLSETNSRV
AAIQTGEAQVTTQLTADATKKLQNAPGVKPLEIIPFCQQYLIVNTQQAPTNNSAIRKALRTAVNAEDILVVSGEAATMDP
SMSYPGGAYYSKENAEPYYNQNNPDEAAKMLADAGHKGEELVLLTNSNYDYMRDNIVLLAEQLQAAGFKARVEMTDWATN
STAMQTGSGKWNVSTTSFCSNPLLGPQQWQSVVYLFPQVKSDALMDTAYKKFFTSLKLEDRRAAWLDIEKHILDEAYMIK
ISNCASGRAYRPDDIGGYPEYYMNFFWNVWLKKQ

Sequences:

>Translated_514_residues
MTIRTLFNAILLSTTLLAAPSLAETPKEGGTLVYASNAGPGTLDPHMGNSLVELEIAHQIYEGLVTIDANYNTATMLAES
YVLSEDGKTLTFKLRKGVKFHDGSDMKSDDVLASFERYAKVSPNAKVLDIVDHYETPDDYTFVIHLKEVNAAFLDTLKSP
VYPFSIIPAEQKDKPARELDIIGTGPFKLGEWKRDSHLYLEKFADYVADKGKPASGYAGEKKVYVDKVRVNFLSETNSRV
AAIQTGEAQVTTQLTADATKKLQNAPGVKPLEIIPFCQQYLIVNTQQAPTNNSAIRKALRTAVNAEDILVVSGEAATMDP
SMSYPGGAYYSKENAEPYYNQNNPDEAAKMLADAGHKGEELVLLTNSNYDYMRDNIVLLAEQLQAAGFKARVEMTDWATN
STAMQTGSGKWNVSTTSFCSNPLLGPQQWQSVVYLFPQVKSDALMDTAYKKFFTSLKLEDRRAAWLDIEKHILDEAYMIK
ISNCASGRAYRPDDIGGYPEYYMNFFWNVWLKKQ
>Mature_513_residues
TIRTLFNAILLSTTLLAAPSLAETPKEGGTLVYASNAGPGTLDPHMGNSLVELEIAHQIYEGLVTIDANYNTATMLAESY
VLSEDGKTLTFKLRKGVKFHDGSDMKSDDVLASFERYAKVSPNAKVLDIVDHYETPDDYTFVIHLKEVNAAFLDTLKSPV
YPFSIIPAEQKDKPARELDIIGTGPFKLGEWKRDSHLYLEKFADYVADKGKPASGYAGEKKVYVDKVRVNFLSETNSRVA
AIQTGEAQVTTQLTADATKKLQNAPGVKPLEIIPFCQQYLIVNTQQAPTNNSAIRKALRTAVNAEDILVVSGEAATMDPS
MSYPGGAYYSKENAEPYYNQNNPDEAAKMLADAGHKGEELVLLTNSNYDYMRDNIVLLAEQLQAAGFKARVEMTDWATNS
TAMQTGSGKWNVSTTSFCSNPLLGPQQWQSVVYLFPQVKSDALMDTAYKKFFTSLKLEDRRAAWLDIEKHILDEAYMIKI
SNCASGRAYRPDDIGGYPEYYMNFFWNVWLKKQ

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=451, Percent_Identity=27.0509977827051, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1789966, Length=405, Percent_Identity=26.4197530864197, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1787551, Length=421, Percent_Identity=24.7030878859857, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1787762, Length=424, Percent_Identity=25.2358490566038, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787495, Length=550, Percent_Identity=21.8181818181818, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1789887, Length=366, Percent_Identity=27.0491803278689, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1789397, Length=351, Percent_Identity=23.0769230769231, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI87081878, Length=530, Percent_Identity=20.9433962264151, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57158; Mature: 57027

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRTLFNAILLSTTLLAAPSLAETPKEGGTLVYASNAGPGTLDPHMGNSLVELEIAHQI
CHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHH
YEGLVTIDANYNTATMLAESYVLSEDGKTLTFKLRKGVKFHDGSDMKSDDVLASFERYAK
HCCEEEEECCCCHHHHHHHHEEEECCCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHC
VSPNAKVLDIVDHYETPDDYTFVIHLKEVNAAFLDTLKSPVYPFSIIPAEQKDKPARELD
CCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCCCEEE
IIGTGPFKLGEWKRDSHLYLEKFADYVADKGKPASGYAGEKKVYVDKVRVNFLSETNSRV
EEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEE
AAIQTGEAQVTTQLTADATKKLQNAPGVKPLEIIPFCQQYLIVNTQQAPTNNSAIRKALR
EEEECCCCEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHH
TAVNAEDILVVSGEAATMDPSMSYPGGAYYSKENAEPYYNQNNPDEAAKMLADAGHKGEE
HHCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
LVLLTNSNYDYMRDNIVLLAEQLQAAGFKARVEMTDWATNSTAMQTGSGKWNVSTTSFCS
EEEEECCCCCHHHCCHHHEEHHHHHCCCEEEEEEECCCCCCCEEECCCCCEEEEEHHHCC
NPLLGPQQWQSVVYLFPQVKSDALMDTAYKKFFTSLKLEDRRAAWLDIEKHILDEAYMIK
CCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEE
ISNCASGRAYRPDDIGGYPEYYMNFFWNVWLKKQ
EECCCCCCCCCCCCCCCCHHHHHHHEEEEEEECC
>Mature Secondary Structure 
TIRTLFNAILLSTTLLAAPSLAETPKEGGTLVYASNAGPGTLDPHMGNSLVELEIAHQI
HHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHH
YEGLVTIDANYNTATMLAESYVLSEDGKTLTFKLRKGVKFHDGSDMKSDDVLASFERYAK
HCCEEEEECCCCHHHHHHHHEEEECCCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHC
VSPNAKVLDIVDHYETPDDYTFVIHLKEVNAAFLDTLKSPVYPFSIIPAEQKDKPARELD
CCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCCCEEE
IIGTGPFKLGEWKRDSHLYLEKFADYVADKGKPASGYAGEKKVYVDKVRVNFLSETNSRV
EEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEE
AAIQTGEAQVTTQLTADATKKLQNAPGVKPLEIIPFCQQYLIVNTQQAPTNNSAIRKALR
EEEECCCCEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHH
TAVNAEDILVVSGEAATMDPSMSYPGGAYYSKENAEPYYNQNNPDEAAKMLADAGHKGEE
HHCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
LVLLTNSNYDYMRDNIVLLAEQLQAAGFKARVEMTDWATNSTAMQTGSGKWNVSTTSFCS
EEEEECCCCCHHHCCHHHEEHHHHHCCCEEEEEEECCCCCCCEEECCCCCEEEEEHHHCC
NPLLGPQQWQSVVYLFPQVKSDALMDTAYKKFFTSLKLEDRRAAWLDIEKHILDEAYMIK
CCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEE
ISNCASGRAYRPDDIGGYPEYYMNFFWNVWLKKQ
EECCCCCCCCCCCCCCCCHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA