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The map label for this gene is dppB [C]

Identifier: 225686552

GI number: 225686552

Start: 745537

End: 746535

Strand: Reverse

Name: dppB [C]

Synonym: BMEA_B0764

Alternate gene names: 225686552

Gene position: 746535-745537 (Counterclockwise)

Preceding gene: 225686553

Following gene: 225686551

Centisome position: 62.97

GC content: 59.56

Gene sequence:

>999_bases
TTGTATCTTGCTGACGTGAAACAGATTCTGGCCCTTTTGCGAAAACGTCTGGTTGGCAGCATGGTGGTGCTGCTGATTGT
CGTGATCGGCTGTTTTTTCATGCTGGAAAGCGCACCGGGCGATGCGGTGGATGCCTATGGGGTCACATTCGGTGGCGATG
TGGGGCAAATCGCCGAAATGCGCGCGCGCTGGGGGCTGGACCAGTCGGTCTGGCGCAGGTTGGGTGCTTATCTGGCTGCT
CTCGCGCAGGGCAATCTTGGCTGGTCGGTTAGCTTCAACCGTCCCATTTTTGACGTGATATCGGAGCGCCTTCCCAACAC
GCTTTTGCTGATGGGGGCAGCGACCGCGCTTTCCTTCGCTGTCGGCTCGTTTTTGGGTGTGGTTGCGGGGGCCAGACCCG
GCAGTTTCCGCGACCGTTTTCTGTCCGTCGCATCGCTCGTCCTTTATGCCGTTCCGGGTTTCTGGCTGGCGCTTGTGCTG
GTTATCCTGTTTTCGATCAAACTGCGCTGGCTGCCTTCCAGCGGCATCGAAACAATCGCTTCCGGCAAGCACGGGCTGGC
GCGGGCAAGCGATATTGCGCGCCACCTGATCTTGCCGGTCGTCTCGCTGGCGGTGATTTATCTGGCGCTTTATCTGCGGG
TCATGCGCGCGGCCATGGCCGATATATGGCGTATGGATTTCGTGCGTGCGCTGCGGGCAAGGGGCATTTCGCGACCCCGC
ATCGTGCTTTTTCATGTGGCGCGCAATGCGCTTTTGCCATTGGTGACAGTGCTTGGTGTGCAGGCTGCTTCCATGCTGGG
CGGCAGTGTGGTGATAGAAAGCGTCTTTGCCGTGCCGGGCCTCGGACGCTTGGCGCAGGAGGCTGTCGCAAGCCGCGATA
CGCCGCTTCTGCTCGGTGTTATCATTACCAGTGCCCTGATGGTGATCCTTGTCAATTTCGTGATCGATCTCGTCTATCTC
TGGCTCGACCCACGCATTGCGGCCGGGGGCAGGGCATGA

Upstream 100 bases:

>100_bases
TTGCCAGCGAGCGCGTGAAAAATGTTTCCAACAATCCGCGCTGGGCGGTTTCCAACTGGGCTGACACATGGCTGGAACCA
TGATGAAGCAACCGGATTGA

Downstream 100 bases:

>100_bases
GCGGGTTGAAACGTTATTTCGCAACAGGTGAAGGCATGGCAGGCGCAGCCATTCTGGTGCTCCTGATACTGGCAGCACTC
TGCGCACCTTTGTTCTTTCC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MYLADVKQILALLRKRLVGSMVVLLIVVIGCFFMLESAPGDAVDAYGVTFGGDVGQIAEMRARWGLDQSVWRRLGAYLAA
LAQGNLGWSVSFNRPIFDVISERLPNTLLLMGAATALSFAVGSFLGVVAGARPGSFRDRFLSVASLVLYAVPGFWLALVL
VILFSIKLRWLPSSGIETIASGKHGLARASDIARHLILPVVSLAVIYLALYLRVMRAAMADIWRMDFVRALRARGISRPR
IVLFHVARNALLPLVTVLGVQAASMLGGSVVIESVFAVPGLGRLAQEAVASRDTPLLLGVIITSALMVILVNFVIDLVYL
WLDPRIAAGGRA

Sequences:

>Translated_332_residues
MYLADVKQILALLRKRLVGSMVVLLIVVIGCFFMLESAPGDAVDAYGVTFGGDVGQIAEMRARWGLDQSVWRRLGAYLAA
LAQGNLGWSVSFNRPIFDVISERLPNTLLLMGAATALSFAVGSFLGVVAGARPGSFRDRFLSVASLVLYAVPGFWLALVL
VILFSIKLRWLPSSGIETIASGKHGLARASDIARHLILPVVSLAVIYLALYLRVMRAAMADIWRMDFVRALRARGISRPR
IVLFHVARNALLPLVTVLGVQAASMLGGSVVIESVFAVPGLGRLAQEAVASRDTPLLLGVIITSALMVILVNFVIDLVYL
WLDPRIAAGGRA
>Mature_332_residues
MYLADVKQILALLRKRLVGSMVVLLIVVIGCFFMLESAPGDAVDAYGVTFGGDVGQIAEMRARWGLDQSVWRRLGAYLAA
LAQGNLGWSVSFNRPIFDVISERLPNTLLLMGAATALSFAVGSFLGVVAGARPGSFRDRFLSVASLVLYAVPGFWLALVL
VILFSIKLRWLPSSGIETIASGKHGLARASDIARHLILPVVSLAVIYLALYLRVMRAAMADIWRMDFVRALRARGISRPR
IVLFHVARNALLPLVTVLGVQAASMLGGSVVIESVFAVPGLGRLAQEAVASRDTPLLLGVIITSALMVILVNFVIDLVYL
WLDPRIAAGGRA

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=315, Percent_Identity=32.6984126984127, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787053, Length=312, Percent_Identity=33.0128205128205, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1789888, Length=297, Percent_Identity=32.3232323232323, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1787497, Length=319, Percent_Identity=28.8401253918495, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787761, Length=335, Percent_Identity=31.044776119403, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787550, Length=267, Percent_Identity=30.3370786516854, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788504, Length=289, Percent_Identity=29.4117647058824, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35764; Mature: 35764

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLADVKQILALLRKRLVGSMVVLLIVVIGCFFMLESAPGDAVDAYGVTFGGDVGQIAEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHH
RARWGLDQSVWRRLGAYLAALAQGNLGWSVSFNRPIFDVISERLPNTLLLMGAATALSFA
HHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH
VGSFLGVVAGARPGSFRDRFLSVASLVLYAVPGFWLALVLVILFSIKLRWLPSSGIETIA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
SGKHGLARASDIARHLILPVVSLAVIYLALYLRVMRAAMADIWRMDFVRALRARGISRPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IVLFHVARNALLPLVTVLGVQAASMLGGSVVIESVFAVPGLGRLAQEAVASRDTPLLLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
IITSALMVILVNFVIDLVYLWLDPRIAAGGRA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MYLADVKQILALLRKRLVGSMVVLLIVVIGCFFMLESAPGDAVDAYGVTFGGDVGQIAEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHH
RARWGLDQSVWRRLGAYLAALAQGNLGWSVSFNRPIFDVISERLPNTLLLMGAATALSFA
HHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH
VGSFLGVVAGARPGSFRDRFLSVASLVLYAVPGFWLALVLVILFSIKLRWLPSSGIETIA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
SGKHGLARASDIARHLILPVVSLAVIYLALYLRVMRAAMADIWRMDFVRALRARGISRPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IVLFHVARNALLPLVTVLGVQAASMLGGSVVIESVFAVPGLGRLAQEAVASRDTPLLLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
IITSALMVILVNFVIDLVYLWLDPRIAAGGRA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA