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The map label for this gene is oxyR [H]

Identifier: 225686482

GI number: 225686482

Start: 667421

End: 668326

Strand: Direct

Name: oxyR [H]

Synonym: BMEA_B0684

Alternate gene names: 225686482

Gene position: 667421-668326 (Clockwise)

Preceding gene: 225686479

Following gene: 225686485

Centisome position: 56.3

GC content: 59.16

Gene sequence:

>906_bases
ATGCTCAATATTAGTGTCAGGCAGCTTCACTATTTTCTCGCACTGGTGCAGGCGGGATCATTTTCACGCGCAGCAGAAGC
CATTGGCGTCACGCAATCCACACTGAGCGCCGCCATTCAGGCCCTTGAAGCCGAGCTTGGCGCGACATTGATCGACCGCA
CCGGCCGGCGGATGCAAATGCTGCCGGCAGGTGAGGACTTTCTGGCGCGTGCCCGCGATATCGTGGCCCTCATCGAAGAA
TTGCCCGAACATGCCCGTCAGGCCGAGCGCCCGCTCACCACACGGCTGCGCATGGGTGTCATCCCTTCCATTGCGCCCTT
TCTTCTGCCCAAGGTTCTGCCGGCCACCGCGAAAGCCTTTCCCGAACTGCAACTGACCGTACGCGAAGGGCTGACGCGCT
CGCTTCTGGAAAGCCTGCGTTCCGGCACGCTCGACGTCGCGCTCGTTGCCCACCCCTATGATCTCGATGAATTCGAGATA
GCCGAAATTGGCCGTGATCCCTTCCTGCTTGCCGTGCGGCGCGACCATGCGCTTGCCAATCGCGATTCGGTCGAGGCGAG
CGATATTGATGACCAGCCTTTCCTTCTACTCGAAACCGGGCATTGCCTGCGCGAACATGTGATGGCTGCAATAGGCTCAA
AGCCTGCGCAAATGAGCGGCGACGTTCATGCCACCAGCATCATGACGCTGGTGCAGCTTGTGCAGTTCGGCATGGGGGTG
ACGCTTCTGCCGCAGCTTGCGATCAAGGCTGGCGTTACGCGCGGTACGGATTTGAGCGTCGTGCCCTATGAAGGAAAGTA
TAATTTCCGTTCGCTGGTTCTGGCCTGGCGCACCAATGCCGCACGGCGCAACGAATTCCAGCTTTTTGCAAACCATCTGC
GCAGCAATTGCTTGCAGGACGTTTGA

Upstream 100 bases:

>100_bases
TATACAGAAAGTTCAGAAATTTCAGAATTTTCCTTCGCGACTCCTTTATAGGCCGCTTGCAACCATCGGTCAAAGCGATT
AAAGCGATTATTCGGGTTTT

Downstream 100 bases:

>100_bases
TTGCCAGCGGTAACTTTCGGGTGAGGCGCTCAGAGAATGCCCCAGGCGCGAAACCGCCCTCGCCCGGTAATCTCCCGCAG
GTTCAGTTCGCCGATCAGTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLNISVRQLHYFLALVQAGSFSRAAEAIGVTQSTLSAAIQALEAELGATLIDRTGRRMQMLPAGEDFLARARDIVALIEE
LPEHARQAERPLTTRLRMGVIPSIAPFLLPKVLPATAKAFPELQLTVREGLTRSLLESLRSGTLDVALVAHPYDLDEFEI
AEIGRDPFLLAVRRDHALANRDSVEASDIDDQPFLLLETGHCLREHVMAAIGSKPAQMSGDVHATSIMTLVQLVQFGMGV
TLLPQLAIKAGVTRGTDLSVVPYEGKYNFRSLVLAWRTNAARRNEFQLFANHLRSNCLQDV

Sequences:

>Translated_301_residues
MLNISVRQLHYFLALVQAGSFSRAAEAIGVTQSTLSAAIQALEAELGATLIDRTGRRMQMLPAGEDFLARARDIVALIEE
LPEHARQAERPLTTRLRMGVIPSIAPFLLPKVLPATAKAFPELQLTVREGLTRSLLESLRSGTLDVALVAHPYDLDEFEI
AEIGRDPFLLAVRRDHALANRDSVEASDIDDQPFLLLETGHCLREHVMAAIGSKPAQMSGDVHATSIMTLVQLVQFGMGV
TLLPQLAIKAGVTRGTDLSVVPYEGKYNFRSLVLAWRTNAARRNEFQLFANHLRSNCLQDV
>Mature_301_residues
MLNISVRQLHYFLALVQAGSFSRAAEAIGVTQSTLSAAIQALEAELGATLIDRTGRRMQMLPAGEDFLARARDIVALIEE
LPEHARQAERPLTTRLRMGVIPSIAPFLLPKVLPATAKAFPELQLTVREGLTRSLLESLRSGTLDVALVAHPYDLDEFEI
AEIGRDPFLLAVRRDHALANRDSVEASDIDDQPFLLLETGHCLREHVMAAIGSKPAQMSGDVHATSIMTLVQLVQFGMGV
TLLPQLAIKAGVTRGTDLSVVPYEGKYNFRSLVLAWRTNAARRNEFQLFANHLRSNCLQDV

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=292, Percent_Identity=33.5616438356164, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI1787879, Length=253, Percent_Identity=30.8300395256917, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1788887, Length=282, Percent_Identity=30.8510638297872, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788748, Length=247, Percent_Identity=27.1255060728745, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI145693105, Length=237, Percent_Identity=24.0506329113924, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI157672245, Length=290, Percent_Identity=28.6206896551724, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1787806, Length=287, Percent_Identity=23.6933797909408, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081904, Length=296, Percent_Identity=25.6756756756757, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787601, Length=187, Percent_Identity=26.7379679144385, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788481, Length=255, Percent_Identity=24.3137254901961, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87082132, Length=260, Percent_Identity=22.3076923076923, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786401, Length=271, Percent_Identity=28.4132841328413, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693193, Length=287, Percent_Identity=25.0871080139373, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787530, Length=254, Percent_Identity=23.6220472440945, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790262, Length=270, Percent_Identity=25.1851851851852, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786508, Length=248, Percent_Identity=23.3870967741935, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788297, Length=251, Percent_Identity=26.2948207171315, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786713, Length=176, Percent_Identity=26.7045454545455, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1789506, Length=241, Percent_Identity=20.3319502074689, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790208, Length=249, Percent_Identity=26.1044176706827, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33098; Mature: 33098

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNISVRQLHYFLALVQAGSFSRAAEAIGVTQSTLSAAIQALEAELGATLIDRTGRRMQM
CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LPAGEDFLARARDIVALIEELPEHARQAERPLTTRLRMGVIPSIAPFLLPKVLPATAKAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
PELQLTVREGLTRSLLESLRSGTLDVALVAHPYDLDEFEIAEIGRDPFLLAVRRDHALAN
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEEECCHHHCC
RDSVEASDIDDQPFLLLETGHCLREHVMAAIGSKPAQMSGDVHATSIMTLVQLVQFGMGV
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
TLLPQLAIKAGVTRGTDLSVVPYEGKYNFRSLVLAWRTNAARRNEFQLFANHLRSNCLQD
HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
V
C
>Mature Secondary Structure
MLNISVRQLHYFLALVQAGSFSRAAEAIGVTQSTLSAAIQALEAELGATLIDRTGRRMQM
CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LPAGEDFLARARDIVALIEELPEHARQAERPLTTRLRMGVIPSIAPFLLPKVLPATAKAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
PELQLTVREGLTRSLLESLRSGTLDVALVAHPYDLDEFEIAEIGRDPFLLAVRRDHALAN
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEEECCHHHCC
RDSVEASDIDDQPFLLLETGHCLREHVMAAIGSKPAQMSGDVHATSIMTLVQLVQFGMGV
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
TLLPQLAIKAGVTRGTDLSVVPYEGKYNFRSLVLAWRTNAARRNEFQLFANHLRSNCLQD
HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA