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The map label for this gene is chbR [C]

Identifier: 225686420

GI number: 225686420

Start: 600371

End: 601288

Strand: Reverse

Name: chbR [C]

Synonym: BMEA_B0613

Alternate gene names: 225686420

Gene position: 601288-600371 (Counterclockwise)

Preceding gene: 225686422

Following gene: 225686418

Centisome position: 50.72

GC content: 52.94

Gene sequence:

>918_bases
ATGCGCAAACGAATCCCTACCTATGAACTCTACGGTGAGGAAACCGACCAAAAGCCTGATTTCTGGCTGCATTGCGAGAC
GCTCTATTCGCGTTCCAGCCTGCACAATTTTGAGATATCGCTGCATCGCCACGATAATTTCTTCCAGTTTCTTTATGTGG
AAAGCGGCACCGGAAATGTAAATTTCGACGGAGTTCTTCACTCGTTTCGCACACCCTGCGCCATTATCGTGCCGCCGAAT
TTCAACCATGGATTTGCATTCTCGCGCAATATTGTCGGCCATATCGTGACCGTCCTGCAACCGCAGATGCCGTTTCTGGA
GAGTGGTTTTGGCACTTCAACCGCAGACTGGATGATGCGTCCAAAGCTTGTGCAGATGGAGGGAGCCGACGAAGCCGATC
TGGCGTTTTTGGCACTCACCATGCGGCACATACAAAGCGAGTATCAATCCAGAAAAATGCATAAAAACAGTATGCTGGAA
TCGCTTCTTAAATCATCGCTTGTGCAGATTATACGCCATGCACTTGCCTTGCAGCCCGAGCACGACACGTGGCAAAGCTA
TCGTGAGCCGCGGATCGAACGCCTTCTGGAACTGATCGACCGACATTTTCGCGAGCACAGGCCGGTGTCATTTTATGCCG
GCCAGCTTGGTCTTTCCGCCACGCATCTCAATCGGCTCACACGCCGGGTTGCCGGTGCGCCTGTGCAACATATGATTGCG
CGCAAACTCATCGATATGGCCAGGCGCGATCTGGTGGCCATGCCGTCATCGGTGCAACATGTCGCTTACAGCCTGGGCTT
CAGCGATCCTGCTTATTTCTCTCGCTTTTTCCAGAAAATGACAGGTGAGACGCCGCGCGCATTCCGCCTGCGAGAAAGAG
AACGGCTCTCCGCTTCCATGCCGGTTACTGCCCAATGA

Upstream 100 bases:

>100_bases
ATGCGATTGAGCCTTTTATTCTTGGGAGCGATTTCCAACTGGCAATGGACTTTTGCAGCAAAAAATTGCACTAACCGAAC
ATGGAACGGGAGGAATGACG

Downstream 100 bases:

>100_bases
CTTGGACTATTCAAACAGGCGCTGCCGCAACATGCTGCGCAATTCCGATTGAATTTTCAGCATTTCCGGCAATATGCGCC
CGACCAGATCGCTGACTTCG

Product: helix-turn-helix- domain containing protein

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator PobR; 4-Hydroxyphenylacetate Catabolism Regulatory Protein HpaA; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulatory Protein; Regulator Of 4HPA-Hydroxylase Operon; PobR Regulator; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Transcription Regulator; Transcriptional Regulator Pobr Arac Family Protein; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; AraC-Family Regulatory Protein; AraC-Family Transcriptional Regulator; AraC/XylS Family Transcription Factor; AraC-Type Regulatory Protein; AraC-Type Transcription Regulator; Helix-Turn-Helix AraC Type; Regulator Of 4hpa-Hydroxylase Operon; Transcriptional Regulator Protein; AraC Family Transcription Regulator Protein; Phosphomethylpyrimidine Kinase

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MRKRIPTYELYGEETDQKPDFWLHCETLYSRSSLHNFEISLHRHDNFFQFLYVESGTGNVNFDGVLHSFRTPCAIIVPPN
FNHGFAFSRNIVGHIVTVLQPQMPFLESGFGTSTADWMMRPKLVQMEGADEADLAFLALTMRHIQSEYQSRKMHKNSMLE
SLLKSSLVQIIRHALALQPEHDTWQSYREPRIERLLELIDRHFREHRPVSFYAGQLGLSATHLNRLTRRVAGAPVQHMIA
RKLIDMARRDLVAMPSSVQHVAYSLGFSDPAYFSRFFQKMTGETPRAFRLRERERLSASMPVTAQ

Sequences:

>Translated_305_residues
MRKRIPTYELYGEETDQKPDFWLHCETLYSRSSLHNFEISLHRHDNFFQFLYVESGTGNVNFDGVLHSFRTPCAIIVPPN
FNHGFAFSRNIVGHIVTVLQPQMPFLESGFGTSTADWMMRPKLVQMEGADEADLAFLALTMRHIQSEYQSRKMHKNSMLE
SLLKSSLVQIIRHALALQPEHDTWQSYREPRIERLLELIDRHFREHRPVSFYAGQLGLSATHLNRLTRRVAGAPVQHMIA
RKLIDMARRDLVAMPSSVQHVAYSLGFSDPAYFSRFFQKMTGETPRAFRLRERERLSASMPVTAQ
>Mature_305_residues
MRKRIPTYELYGEETDQKPDFWLHCETLYSRSSLHNFEISLHRHDNFFQFLYVESGTGNVNFDGVLHSFRTPCAIIVPPN
FNHGFAFSRNIVGHIVTVLQPQMPFLESGFGTSTADWMMRPKLVQMEGADEADLAFLALTMRHIQSEYQSRKMHKNSMLE
SLLKSSLVQIIRHALALQPEHDTWQSYREPRIERLLELIDRHFREHRPVSFYAGQLGLSATHLNRLTRRVAGAPVQHMIA
RKLIDMARRDLVAMPSSVQHVAYSLGFSDPAYFSRFFQKMTGETPRAFRLRERERLSASMPVTAQ

Specific function: Repressor For The Chbbcarfg Operon (Probable). [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35381; Mature: 35381

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRIPTYELYGEETDQKPDFWLHCETLYSRSSLHNFEISLHRHDNFFQFLYVESGTGNV
CCCCCCCHHCCCCCCCCCCCEEEEHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCC
NFDGVLHSFRTPCAIIVPPNFNHGFAFSRNIVGHIVTVLQPQMPFLESGFGTSTADWMMR
CHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHC
PKLVQMEGADEADLAFLALTMRHIQSEYQSRKMHKNSMLESLLKSSLVQIIRHALALQPE
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDTWQSYREPRIERLLELIDRHFREHRPVSFYAGQLGLSATHLNRLTRRVAGAPVQHMIA
CHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHH
RKLIDMARRDLVAMPSSVQHVAYSLGFSDPAYFSRFFQKMTGETPRAFRLRERERLSASM
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
PVTAQ
CCCCC
>Mature Secondary Structure
MRKRIPTYELYGEETDQKPDFWLHCETLYSRSSLHNFEISLHRHDNFFQFLYVESGTGNV
CCCCCCCHHCCCCCCCCCCCEEEEHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCC
NFDGVLHSFRTPCAIIVPPNFNHGFAFSRNIVGHIVTVLQPQMPFLESGFGTSTADWMMR
CHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHC
PKLVQMEGADEADLAFLALTMRHIQSEYQSRKMHKNSMLESLLKSSLVQIIRHALALQPE
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDTWQSYREPRIERLLELIDRHFREHRPVSFYAGQLGLSATHLNRLTRRVAGAPVQHMIA
CHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHH
RKLIDMARRDLVAMPSSVQHVAYSLGFSDPAYFSRFFQKMTGETPRAFRLRERERLSASM
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
PVTAQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA