| Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_012442 |
| Length | 1,185,518 |
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The map label for this gene is recG [H]
Identifier: 225686367
GI number: 225686367
Start: 541793
End: 543913
Strand: Direct
Name: recG [H]
Synonym: BMEA_B0555
Alternate gene names: 225686367
Gene position: 541793-543913 (Clockwise)
Preceding gene: 225686363
Following gene: 225686371
Centisome position: 45.7
GC content: 60.16
Gene sequence:
>2121_bases ATGTTCGACCCCATGCGCCCATCCATGCTCGATCCATTTTTTGCGTCCGTCCGTTCACTTTCAGGCATCGGCCCGAAAGT GGCCGTCCTGCTTGGAAAATTGCTGGGAACCGATGTGCCGGGCGGCGAACCGAAAATAGGCCAGCTTCTTTTCCTTCCGC CCCACAGCATCATTGACCGGCGCAACCGGCCCGGTATCGCTTTTGCGCAGGAGGGGGCCATTGTCACGCTGGAAGTGACC GTCGATCAGCACCAGCCCGCACCGAAAGGGCGTGGCAATGTTCCCCACCGTGTTTTTGCACATGACGATACGGGGGAAAT CGCGCTGACCTTCTTCCACGCCCAATTGCCCTGGCTGCAAAAGATGCTGCCGGAAGGCGAAACCGTTATTGTTTCAGGCA AGGTGGAATGGTTCAACGGGCGCGCTTCCATGGTGCACCCGGATTATATTGCAAGCATGGACGATGCCGCCAGCCTGCCG CTTGTCGAGCCGGTCTATCCGCTGACGGCCGGCCTCTCACCCAAGACACTTGGCCGCGCCATCAAGGAGGCGCTGACCCG CGTGCCTGTCCTGCCGGAATGGATCGATGCGCCTTTGCTGGCGCGCGAAGGTTTCCCAGCGTTTCAGCAGGCGCTCAACA CGCTGCATCAACCGGAAGACCCCGGCGATATCGCGCTTGAAAGCATTACGCGGCGCAGGCTTGCCTATGATGAATTTCTG GCGGGCCAACTGGCGCTTGCCCTTGTGCGCGCCAAGACTCGCAGGCTTTCAGGCCGCCCGCTTGAAGGCACCGGCAACAT CGTGGCCGAAATCATGCGCCACCTGCCCTATCGCCTGACCAAAGCCCAGGAACAGGCCGTGCGTGAGATCATCACCGACC TCAAATCGCCCCAGCGCATGTTGCGGCTTTTGCAGGGCGATGTCGGTTCCGGCAAAACCGTGGTGGGCCTGCTTTCCATG GCCCATGCGGCTGAATCCGGCGGGCAATCGGCACTCATGGCCCCAACGGAAGTGCTGGCACGCCAGCATTTTGCAACTAT CGCGCCGCTCGCGGAAAAAGCCGGGTTGAAAGCGGCCCTTCTTACAGGCCGCGAAAAGGGGCGCGAACGAAATGCCGTTC TGGAAGGGTTGAAAAGCGGCGAAATCGATATTGTCATCGGCACGCATGCGCTGTTTCAGGAAAAGGTCGAATATCACGAT CTGGTTTTTGTCATCATCGACGAACAGCACCGTTTCGGCGTCCATCAGCGCCTCATGCTGACCGCCAAAGGCTCCGCGCC CGACATGCTGGTGATGACCGCAACGCCGATCCCGCGCACGCTTGTTCTCACCGCCTTCGGCGATATGGACGTGTCCAAGC TCACGGAAAAGCCTGTCGGACGCCAGCCCATCACCACCGCAATCGTGCCGATGGAACGCATGGGCGAACTGGTGGAGCGC ATCAGAAAGGCGGTCAGTGAAGACCAGAAGATTTACTGGATTTGCCCTCTGGTCGAGGAATCTGAAGTCGTTGAACTGAC ATCAGCCGAGGAGCGTTTCGAGAGCCTCAAATCCGTTTTCGGCGAGCGGATCGGCCTTATTCATGGCCGCATGAGCGGCG CGGAAAAAGACGAAGCCATGCGCGCCTTCAAACAGGGCGAGACGCGGCTTCTGGTGGCGACAACCGTGATCGAGGTTGGT GTGGACGTGCCCGATGCCACCATCATCGTCATCGAACATGCGGAACGTTTCGGCCTGTCGCAATTGCACCAGTTGCGCGG GCGCGTGGGGCGCGGCGACAAGCCCTCAACCTGTCTTCTGCTCTATAAGGGGCCGCTTGGTGAGATTGCGCAGGCGCGGC TGAAAGTGATGCGCGAAACAGAAGACGGTTTCCGCATTGCAGAAGAAGACCTGAAATTGCGCGGCGAAGGCGAATTGCTG GGCACGCGCCAGTCCGGCACGCCGGGTTTCCGCCTTGCCTCCATCGAGGCGCATGGTGACCTTCTGGAGATCGCCCGCAA GGATGCGCGCTATATTCTGGCGAGCGATCCCGATCTGGAATCCGAACGCGGGCAGGCTTTGCGTGTGCTGCTCTATCTCT TCGGGCGCGACGAGGCCATCCGCCTGCTTAGGGCAGGATAG
Upstream 100 bases:
>100_bases ATAGCATCTGGGGCGCAAACGGGAACCCGTTTATCGGATAAGAACAAAAAGAGCACAGAAAGATTGCGCACCGCCCTTGC GCCGCGAGGCGAAGCAGTTA
Downstream 100 bases:
>100_bases CACTCTCTTTGCTCCCCCTCATCCTGAGATGCGGAGCAAAGCGAAGCCTCGAATTGCGATAAGTCTATTGAGAACCAATG CCTTACCCGTCGAGACGGTG
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MFDPMRPSMLDPFFASVRSLSGIGPKVAVLLGKLLGTDVPGGEPKIGQLLFLPPHSIIDRRNRPGIAFAQEGAIVTLEVT VDQHQPAPKGRGNVPHRVFAHDDTGEIALTFFHAQLPWLQKMLPEGETVIVSGKVEWFNGRASMVHPDYIASMDDAASLP LVEPVYPLTAGLSPKTLGRAIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPEDPGDIALESITRRRLAYDEFL AGQLALALVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSM AHAAESGGQSALMAPTEVLARQHFATIAPLAEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHD LVFVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIVPMERMGELVER IRKAVSEDQKIYWICPLVEESEVVELTSAEERFESLKSVFGERIGLIHGRMSGAEKDEAMRAFKQGETRLLVATTVIEVG VDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPSTCLLLYKGPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELL GTRQSGTPGFRLASIEAHGDLLEIARKDARYILASDPDLESERGQALRVLLYLFGRDEAIRLLRAG
Sequences:
>Translated_706_residues MFDPMRPSMLDPFFASVRSLSGIGPKVAVLLGKLLGTDVPGGEPKIGQLLFLPPHSIIDRRNRPGIAFAQEGAIVTLEVT VDQHQPAPKGRGNVPHRVFAHDDTGEIALTFFHAQLPWLQKMLPEGETVIVSGKVEWFNGRASMVHPDYIASMDDAASLP LVEPVYPLTAGLSPKTLGRAIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPEDPGDIALESITRRRLAYDEFL AGQLALALVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSM AHAAESGGQSALMAPTEVLARQHFATIAPLAEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHD LVFVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIVPMERMGELVER IRKAVSEDQKIYWICPLVEESEVVELTSAEERFESLKSVFGERIGLIHGRMSGAEKDEAMRAFKQGETRLLVATTVIEVG VDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPSTCLLLYKGPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELL GTRQSGTPGFRLASIEAHGDLLEIARKDARYILASDPDLESERGQALRVLLYLFGRDEAIRLLRAG >Mature_706_residues MFDPMRPSMLDPFFASVRSLSGIGPKVAVLLGKLLGTDVPGGEPKIGQLLFLPPHSIIDRRNRPGIAFAQEGAIVTLEVT VDQHQPAPKGRGNVPHRVFAHDDTGEIALTFFHAQLPWLQKMLPEGETVIVSGKVEWFNGRASMVHPDYIASMDDAASLP LVEPVYPLTAGLSPKTLGRAIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPEDPGDIALESITRRRLAYDEFL AGQLALALVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSM AHAAESGGQSALMAPTEVLARQHFATIAPLAEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHD LVFVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIVPMERMGELVER IRKAVSEDQKIYWICPLVEESEVVELTSAEERFESLKSVFGERIGLIHGRMSGAEKDEAMRAFKQGETRLLVATTVIEVG VDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPSTCLLLYKGPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELL GTRQSGTPGFRLASIEAHGDLLEIARKDARYILASDPDLESERGQALRVLLYLFGRDEAIRLLRAG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=685, Percent_Identity=40.2919708029197, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI1787357, Length=386, Percent_Identity=36.7875647668394, Blast_Score=232, Evalue=7e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 77546; Mature: 77546
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDPMRPSMLDPFFASVRSLSGIGPKVAVLLGKLLGTDVPGGEPKIGQLLFLPPHSIIDR CCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCC RNRPGIAFAQEGAIVTLEVTVDQHQPAPKGRGNVPHRVFAHDDTGEIALTFFHAQLPWLQ CCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHCHHHH KMLPEGETVIVSGKVEWFNGRASMVHPDYIASMDDAASLPLVEPVYPLTAGLSPKTLGRA HHCCCCCEEEEEEEEEEECCCCCEECCHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH IKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPEDPGDIALESITRRRLAYDEFL HHHHHHHCCCCHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AGQLALALVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRM HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH LRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLARQHFATIAPLAEKAGLKAAL HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEE LTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVFVIIDEQHRFGVHQRLML CCCHHCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCCHHCCCCEEEEE TAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIVPMERMGELVER EECCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCHHHHCCHHHHHHHHHH IRKAVSEDQKIYWICPLVEESEVVELTSAEERFESLKSVFGERIGLIHGRMSGAEKDEAM HHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAFKQGETRLLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPSTCLL HHHHCCCCEEEEEEEHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCCCCCEEEE LYKGPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHGD EEECCHHHHHHHHHHHHHCCCCCCEEEHHHHEECCCCCEEECCCCCCCCEEEEEECCCCH LLEIARKDARYILASDPDLESERGQALRVLLYLFGRDEAIRLLRAG HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MFDPMRPSMLDPFFASVRSLSGIGPKVAVLLGKLLGTDVPGGEPKIGQLLFLPPHSIIDR CCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCC RNRPGIAFAQEGAIVTLEVTVDQHQPAPKGRGNVPHRVFAHDDTGEIALTFFHAQLPWLQ CCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHCHHHH KMLPEGETVIVSGKVEWFNGRASMVHPDYIASMDDAASLPLVEPVYPLTAGLSPKTLGRA HHCCCCCEEEEEEEEEEECCCCCEECCHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH IKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPEDPGDIALESITRRRLAYDEFL HHHHHHHCCCCHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AGQLALALVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRM HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH LRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLARQHFATIAPLAEKAGLKAAL HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEE LTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVFVIIDEQHRFGVHQRLML CCCHHCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCCHHCCCCEEEEE TAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIVPMERMGELVER EECCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCHHHHCCHHHHHHHHHH IRKAVSEDQKIYWICPLVEESEVVELTSAEERFESLKSVFGERIGLIHGRMSGAEKDEAM HHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAFKQGETRLLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPSTCLL HHHHCCCCEEEEEEEHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCCCCCEEEE LYKGPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHGD EEECCHHHHHHHHHHHHHCCCCCCEEEHHHHEECCCCCEEECCCCCCCCEEEEEECCCCH LLEIARKDARYILASDPDLESERGQALRVLLYLFGRDEAIRLLRAG HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]