| Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_012442 |
| Length | 1,185,518 |
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The map label for this gene is nrdI
Identifier: 225686156
GI number: 225686156
Start: 297780
End: 298187
Strand: Direct
Name: nrdI
Synonym: BMEA_B0315
Alternate gene names: 225686156
Gene position: 297780-298187 (Clockwise)
Preceding gene: 225686155
Following gene: 225686157
Centisome position: 25.12
GC content: 56.86
Gene sequence:
>408_bases ATGAGCCTGATCGTCTATTTTTCCAGCCGTTCCGGCAATACGCACCGCTTTGTCGAGCGGCTGGGGGTGCGCTCAAGCCG CATTCCGCTTGAGGCTTCAGGCGCGTTGCAGGTGCGTGAACCTTTCGTGCTGGTCACACCGACCTATGGCGGCGGCAGCA CGAAAGGCGCGGTGCCGAATCCGGTGATCCGCTTTCTTAATGATGCAGATAATCGAGCTCTGATCCGCGGTGTGATCGCG GCAGGCAACAGCAATTTCGGCGAGGCTTTCTGCATCGCCGGCAACATTATTTCCGCCAAATGCGGGGTTCCCTATCTTTA CCGCTTTGAACTTCTGGGAACCGCCGAGGACGTTGGCAATGTCAGAAACGGGATGGAACAATTTTGGACACGCCAGACAC AAGCCTGA
Upstream 100 bases:
>100_bases ATGGGCTATCGCCAGGTGCCGGTGGTGGTTGCCGGTGAAAATCATTGGGCGGGTTTTCGGCCGGATATGATCAGTTCGCT GGCCTGAGGACCATTCCGCA
Downstream 100 bases:
>100_bases TCCGGGAACGCGAGGCAGAGGCGGTGCAGGGCGCACCGGAGCCGGTGGCAATGACCGCCGGAAAGCCTGCCAAGTCTTCG GACGGGCTGGACTACCATGC
Product: ribonucleotide reductase stimulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSLIVYFSSRSGNTHRFVERLGVRSSRIPLEASGALQVREPFVLVTPTYGGGSTKGAVPNPVIRFLNDADNRALIRGVIA AGNSNFGEAFCIAGNIISAKCGVPYLYRFELLGTAEDVGNVRNGMEQFWTRQTQA
Sequences:
>Translated_135_residues MSLIVYFSSRSGNTHRFVERLGVRSSRIPLEASGALQVREPFVLVTPTYGGGSTKGAVPNPVIRFLNDADNRALIRGVIA AGNSNFGEAFCIAGNIISAKCGVPYLYRFELLGTAEDVGNVRNGMEQFWTRQTQA >Mature_134_residues SLIVYFSSRSGNTHRFVERLGVRSSRIPLEASGALQVREPFVLVTPTYGGGSTKGAVPNPVIRFLNDADNRALIRGVIAA GNSNFGEAFCIAGNIISAKCGVPYLYRFELLGTAEDVGNVRNGMEQFWTRQTQA
Specific function: Probably involved in ribonucleotide reductase function
COG id: COG1780
COG function: function code F; Protein involved in ribonucleotide reduction
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nrdI family
Homologues:
Organism=Escherichia coli, GI1789029, Length=134, Percent_Identity=62.6865671641791, Blast_Score=181, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NRDI_BRUA1 (B2SBS5)
Other databases:
- EMBL: CP000888 - RefSeq: YP_001932758.1 - ProteinModelPortal: B2SBS5 - SMR: B2SBS5 - GeneID: 6325958 - GenomeReviews: CP000888_GR - KEGG: bmc:BAbS19_II08190 - HOGENOM: HBG697191 - OMA: FELMGTA - ProtClustDB: PRK03600 - HAMAP: MF_00128 - InterPro: IPR020852 - InterPro: IPR004465 - PIRSF: PIRSF005087 - TIGRFAMs: TIGR00333
Pfam domain/function: PF07972 Flavodoxin_NdrI
EC number: NA
Molecular weight: Translated: 14656; Mature: 14525
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIVYFSSRSGNTHRFVERLGVRSSRIPLEASGALQVREPFVLVTPTYGGGSTKGAVPN CEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCH PVIRFLNDADNRALIRGVIAAGNSNFGEAFCIAGNIISAKCGVPYLYRFELLGTAEDVGN HHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCEEECCCCCCEEEEEEEECCHHHHHH VRNGMEQFWTRQTQA HHHHHHHHHHHCCCC >Mature Secondary Structure SLIVYFSSRSGNTHRFVERLGVRSSRIPLEASGALQVREPFVLVTPTYGGGSTKGAVPN EEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCH PVIRFLNDADNRALIRGVIAAGNSNFGEAFCIAGNIISAKCGVPYLYRFELLGTAEDVGN HHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCEEECCCCCCEEEEEEEECCHHHHHH VRNGMEQFWTRQTQA HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA