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The map label for this gene is bsdB [H]

Identifier: 225686138

GI number: 225686138

Start: 274223

End: 274813

Strand: Direct

Name: bsdB [H]

Synonym: BMEA_B0294

Alternate gene names: 225686138

Gene position: 274223-274813 (Clockwise)

Preceding gene: 225686137

Following gene: 225686146

Centisome position: 23.13

GC content: 62.27

Gene sequence:

>591_bases
ATGAAGCGGATCGTCATCGGTGTTTCGGGTGCTTCGGGCTCCCTCATTCCTCTCAAGCTTCTTGAGCGGCTCGCGGTGAT
GGAGGAGGTGGAAACCCACCTTGTCATTTCCGATGCCGCGCAGCAGACCTTGCGCTACGAGCTTGGAGCGAACGGCTATT
CCTTGCTGTACCGGCTGGCCGCGCGCACCTATGCGGTGGAGGATGTGGGGGCGGCGATTGCCAGCGGCTCGGTGCCGACG
GCGGGGATGATTATTGCGCCCTGTTCCATGCGCACACTTTCAGCCATTGCCAATGGCTATAGCGACAGCCTGTTGACGCG
GGCTGCGGATGTGCACCTCAAAGAGCGCCGCAAGCTCGTGCTGATCGCGCGCGAAACGCCGCTTCATCTGGTTCACCTGC
GCAATATGTGCACGGTCACGGAAATGGGCGCAATCGTCATGCCGCCCGTGCCTGCCTTCTATCTTCAGCCGCAGACGGTG
GAGGATGTAGCGAGCCAGGTCGCCGCGCGCGCCATTGATCTCATTGGCGTCGGCACACCGCAGGCGCAAAGCTGGAACCC
GGAAGAAAAACCCCGCCGGAAGGCGGGGTGA

Upstream 100 bases:

>100_bases
CGGACCGCGAATGGGGCAAGGTTCTGGCCATGAATGAAGAAACCATCGCCCGTGTGGACGCGATCTGGGATGAACTCGGC
CTCGACAGGGACAAACGGAT

Downstream 100 bases:

>100_bases
AAAAGCCGTTCAGATTGCCGCGCGCAAAGGCGGGGCCATCACCGCATTGAACCAGTCGGTGACACTTTCGCTGTTGGGGG
CAAGCAAGGTGCCGCAAGGG

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: PAD; 4-hydroxybenzoate decarboxylase subunit B; 4-hydroxybenzoate DC; Phenylacrylic acid decarboxylase subunit B; Vanillate decarboxylase subunit B [H]

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKRIVIGVSGASGSLIPLKLLERLAVMEEVETHLVISDAAQQTLRYELGANGYSLLYRLAARTYAVEDVGAAIASGSVPT
AGMIIAPCSMRTLSAIANGYSDSLLTRAADVHLKERRKLVLIARETPLHLVHLRNMCTVTEMGAIVMPPVPAFYLQPQTV
EDVASQVAARAIDLIGVGTPQAQSWNPEEKPRRKAG

Sequences:

>Translated_196_residues
MKRIVIGVSGASGSLIPLKLLERLAVMEEVETHLVISDAAQQTLRYELGANGYSLLYRLAARTYAVEDVGAAIASGSVPT
AGMIIAPCSMRTLSAIANGYSDSLLTRAADVHLKERRKLVLIARETPLHLVHLRNMCTVTEMGAIVMPPVPAFYLQPQTV
EDVASQVAARAIDLIGVGTPQAQSWNPEEKPRRKAG
>Mature_196_residues
MKRIVIGVSGASGSLIPLKLLERLAVMEEVETHLVISDAAQQTLRYELGANGYSLLYRLAARTYAVEDVGAAIASGSVPT
AGMIIAPCSMRTLSAIANGYSDSLLTRAADVHLKERRKLVLIARETPLHLVHLRNMCTVTEMGAIVMPPVPAFYLQPQTV
EDVASQVAARAIDLIGVGTPQAQSWNPEEKPRRKAG

Specific function: Part of the BsdBCD complex involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate, vanillate and salicylate. Is not

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=183, Percent_Identity=51.3661202185792, Blast_Score=185, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6320746, Length=185, Percent_Identity=44.3243243243243, Blast_Score=167, Evalue=9e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: =4.1.1.61 [H]

Molecular weight: Translated: 21087; Mature: 21087

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIVIGVSGASGSLIPLKLLERLAVMEEVETHLVISDAAQQTLRYELGANGYSLLYRLA
CCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCHHHHHHHHH
ARTYAVEDVGAAIASGSVPTAGMIIAPCSMRTLSAIANGYSDSLLTRAADVHLKERRKLV
HHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEE
LIARETPLHLVHLRNMCTVTEMGAIVMPPVPAFYLQPQTVEDVASQVAARAIDLIGVGTP
EEECCCCEEEEHHHHHHHHHHCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
QAQSWNPEEKPRRKAG
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRIVIGVSGASGSLIPLKLLERLAVMEEVETHLVISDAAQQTLRYELGANGYSLLYRLA
CCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCHHHHHHHHH
ARTYAVEDVGAAIASGSVPTAGMIIAPCSMRTLSAIANGYSDSLLTRAADVHLKERRKLV
HHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEE
LIARETPLHLVHLRNMCTVTEMGAIVMPPVPAFYLQPQTVEDVASQVAARAIDLIGVGTP
EEECCCCEEEEHHHHHHHHHHCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
QAQSWNPEEKPRRKAG
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]