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The map label for this gene is ubiD [H]

Identifier: 225686137

GI number: 225686137

Start: 272889

End: 274226

Strand: Direct

Name: ubiD [H]

Synonym: BMEA_B0293

Alternate gene names: 225686137

Gene position: 272889-274226 (Clockwise)

Preceding gene: 225686132

Following gene: 225686138

Centisome position: 23.02

GC content: 60.69

Gene sequence:

>1338_bases
ATGAAAAGCAGTTCCTCTTTACCTACTCACTATGATTGCCTGCAAAGCTTCCTGACGGAACTGGAAAAGCGTGGCGATCT
TGTCCGTATTGCGCGTCCTGTATCCCTTGTGCATGAGGTGACGGAAATCCATCGCCGTGCGCCGAAGCCGCCGCGTTCGG
CCGGTGAAATATGGGAAAAGCTGCCGATGGCCAAGGCAGCCCTCAACATGCGCCCGCGCCAGGTGAGCCGGGCGCCGGTT
CATGGCCTTGTGATGGAAGGCGCATCGGTCAATCTCGACACGCTGCCGATCCAATGGTGCTGGCCGGGCGAGCCTGCGCC
GCTCATCACCTGGCCGCTCGTTATCACACGCGCGCCGGACGATCCCTCCGATGTCAATGTCGGCATTTACCGGATGCAGA
AACTGGGAGAGAACCGGCTTATCATGCGCTGGCTCGCGCATCGCGGCGGCGCGCGCCACCATCGCATGTGGCAAAAGCGC
GGTGAGGACATGCCGGTTGCAATTGCCATCGGCGTTGACCCGGCGACCATTCTGGCCGCAGTTATGCCGCTGCCGGAAGG
CATGAGCGAGCTTGCATTTTCCGGCCTTCTGGGCGGGCGCAGGCCGTGTGTCACGCAGGGGCGCACGGTGCCGCTGATGG
TGCCCGCCAATGCAGAAATCGTTCTTGAAGGTCGGGTTTCCGCTACACAAACCGCGCCCGAAGGGCCTTATGGGGACCAT
ACCGGCTATTATAACAGCGTGGAGGCGTTTCCCGTCATGCAGGTGACGGCGATCACCATGCGCAAGAAGCCGGTCTATCT
TTCCACCTATACGGAGCGCCCGCCGGACGAGCCTTCGCGGCTTGGCGAGGTGATGAACCAGCTTTTCGTGCCTGTCGTGC
GCAAGCAGTTTCCCGAGATAGCCGATCTCTGGCTGCCGCCTGCCGCCTGTTCCTACCGCGCCATGGTGGTTTCCATCGAC
AAGCGTTATCCGGGGCAGGCGCGGCGCGTGATGATGGGGCTTTGGTCCATGCTGCCGCAGTTCAGCTATACCAAGCTCAT
TATCGCCGTCGATCCCGATATCGATGTACACAACTGGGACGATGTGATGTGGGCGCTTGCCACCCGCTTTGATGCAAGCC
GCGACGTGGTGACACTTTCCGACACGCCGGTCGATTATCTGGATTTCGCCTCGCCACGCTCCGGCCTTGGCGGAAAGCTC
GGTCTTGACGCCACCAACAAGATCGGTCCTGAAACGGACCGCGAATGGGGCAAGGTTCTGGCCATGAATGAAGAAACCAT
CGCCCGTGTGGACGCGATCTGGGATGAACTCGGCCTCGACAGGGACAAACGGATATGA

Upstream 100 bases:

>100_bases
TCTGGCCGGGGGACGCTTCCGCAAGGATTATGCGATTCAACTCCAATTGAGTTTGATCCAAATCAAGGACGCATGAAGAA
TTGCATATTCAAAGTGGATC

Downstream 100 bases:

>100_bases
AGCGGATCGTCATCGGTGTTTCGGGTGCTTCGGGCTCCCTCATTCCTCTCAAGCTTCTTGAGCGGCTCGCGGTGATGGAG
GAGGTGGAAACCCACCTTGT

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKSSSSLPTHYDCLQSFLTELEKRGDLVRIARPVSLVHEVTEIHRRAPKPPRSAGEIWEKLPMAKAALNMRPRQVSRAPV
HGLVMEGASVNLDTLPIQWCWPGEPAPLITWPLVITRAPDDPSDVNVGIYRMQKLGENRLIMRWLAHRGGARHHRMWQKR
GEDMPVAIAIGVDPATILAAVMPLPEGMSELAFSGLLGGRRPCVTQGRTVPLMVPANAEIVLEGRVSATQTAPEGPYGDH
TGYYNSVEAFPVMQVTAITMRKKPVYLSTYTERPPDEPSRLGEVMNQLFVPVVRKQFPEIADLWLPPAACSYRAMVVSID
KRYPGQARRVMMGLWSMLPQFSYTKLIIAVDPDIDVHNWDDVMWALATRFDASRDVVTLSDTPVDYLDFASPRSGLGGKL
GLDATNKIGPETDREWGKVLAMNEETIARVDAIWDELGLDRDKRI

Sequences:

>Translated_445_residues
MKSSSSLPTHYDCLQSFLTELEKRGDLVRIARPVSLVHEVTEIHRRAPKPPRSAGEIWEKLPMAKAALNMRPRQVSRAPV
HGLVMEGASVNLDTLPIQWCWPGEPAPLITWPLVITRAPDDPSDVNVGIYRMQKLGENRLIMRWLAHRGGARHHRMWQKR
GEDMPVAIAIGVDPATILAAVMPLPEGMSELAFSGLLGGRRPCVTQGRTVPLMVPANAEIVLEGRVSATQTAPEGPYGDH
TGYYNSVEAFPVMQVTAITMRKKPVYLSTYTERPPDEPSRLGEVMNQLFVPVVRKQFPEIADLWLPPAACSYRAMVVSID
KRYPGQARRVMMGLWSMLPQFSYTKLIIAVDPDIDVHNWDDVMWALATRFDASRDVVTLSDTPVDYLDFASPRSGLGGKL
GLDATNKIGPETDREWGKVLAMNEETIARVDAIWDELGLDRDKRI
>Mature_445_residues
MKSSSSLPTHYDCLQSFLTELEKRGDLVRIARPVSLVHEVTEIHRRAPKPPRSAGEIWEKLPMAKAALNMRPRQVSRAPV
HGLVMEGASVNLDTLPIQWCWPGEPAPLITWPLVITRAPDDPSDVNVGIYRMQKLGENRLIMRWLAHRGGARHHRMWQKR
GEDMPVAIAIGVDPATILAAVMPLPEGMSELAFSGLLGGRRPCVTQGRTVPLMVPANAEIVLEGRVSATQTAPEGPYGDH
TGYYNSVEAFPVMQVTAITMRKKPVYLSTYTERPPDEPSRLGEVMNQLFVPVVRKQFPEIADLWLPPAACSYRAMVVSID
KRYPGQARRVMMGLWSMLPQFSYTKLIIAVDPDIDVHNWDDVMWALATRFDASRDVVTLSDTPVDYLDFASPRSGLGGKL
GLDATNKIGPETDREWGKVLAMNEETIARVDAIWDELGLDRDKRI

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=410, Percent_Identity=52.4390243902439, Blast_Score=448, Evalue=1e-127,
Organism=Saccharomyces cerevisiae, GI6320748, Length=382, Percent_Identity=25.130890052356, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 49697; Mature: 49697

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSSSLPTHYDCLQSFLTELEKRGDLVRIARPVSLVHEVTEIHRRAPKPPRSAGEIWEK
CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LPMAKAALNMRPRQVSRAPVHGLVMEGASVNLDTLPIQWCWPGEPAPLITWPLVITRAPD
HHHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCC
DPSDVNVGIYRMQKLGENRLIMRWLAHRGGARHHRMWQKRGEDMPVAIAIGVDPATILAA
CCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHH
VMPLPEGMSELAFSGLLGGRRPCVTQGRTVPLMVPANAEIVLEGRVSATQTAPEGPYGDH
HHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCC
TGYYNSVEAFPVMQVTAITMRKKPVYLSTYTERPPDEPSRLGEVMNQLFVPVVRKQFPEI
CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
ADLWLPPAACSYRAMVVSIDKRYPGQARRVMMGLWSMLPQFSYTKLIIAVDPDIDVHNWD
HHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHH
DVMWALATRFDASRDVVTLSDTPVDYLDFASPRSGLGGKLGLDATNKIGPETDREWGKVL
HHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE
AMNEETIARVDAIWDELGLDRDKRI
EECHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKSSSSLPTHYDCLQSFLTELEKRGDLVRIARPVSLVHEVTEIHRRAPKPPRSAGEIWEK
CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LPMAKAALNMRPRQVSRAPVHGLVMEGASVNLDTLPIQWCWPGEPAPLITWPLVITRAPD
HHHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCC
DPSDVNVGIYRMQKLGENRLIMRWLAHRGGARHHRMWQKRGEDMPVAIAIGVDPATILAA
CCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHH
VMPLPEGMSELAFSGLLGGRRPCVTQGRTVPLMVPANAEIVLEGRVSATQTAPEGPYGDH
HHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCC
TGYYNSVEAFPVMQVTAITMRKKPVYLSTYTERPPDEPSRLGEVMNQLFVPVVRKQFPEI
CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
ADLWLPPAACSYRAMVVSIDKRYPGQARRVMMGLWSMLPQFSYTKLIIAVDPDIDVHNWD
HHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHH
DVMWALATRFDASRDVVTLSDTPVDYLDFASPRSGLGGKLGLDATNKIGPETDREWGKVL
HHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE
AMNEETIARVDAIWDELGLDRDKRI
EECHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA