| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630997
Identifier: 225630997
GI number: 225630997
Start: 1412860
End: 1413840
Strand: Reverse
Name: 225630997
Synonym: WRi_013240
Alternate gene names: NA
Gene position: 1413840-1412860 (Counterclockwise)
Preceding gene: 225630998
Following gene: 225630992
Centisome position: 97.78
GC content: 33.64
Gene sequence:
>981_bases ATGACAAACAAAAATGACAATTCTAATTCAAAGTATAGAAATTTTTATGTTCTGGGTGATAGCTTATCCGATAATGGCGC AATCATTGGAATTTTAAATAATTTATCCTTTGCAAAAAGCGTAAAATTTGATGATCCTTTTTATCAAGGAAGATCTTTTA GCAATAGCCCTACTGCTGTTGAATATATAGCAAAATATTTAGATTTAGATGAATTTAAACCTGGGTGGAGTTATTCATTT TTTGGGAGATGCCACGAACAGCAAGGTCAGAATTACGCAGTTTCATATGCAACAGCATCTGAAATTTTTGACCCTATTTT TTCTTATTTCTTCAATAAATTTCGTTTAGCTAACCAGCTAGATGCGGTAATTAAACATCATCCAGATATAGGTAAAGAAG ATTTATTTTGCATCATAATCGGCGGAAATGATGTTATGGTTGCCACTGCTTATGACGATACTAAAGCGGAAGAAGTGTTG GAACAAGCAGTGAGTGAAATATGTAATGCACTTAAGGTTCTAAATGAACATGGTGTTAAGCATGTAGTTGTTGCAAATGC ACCTGAAGTTGGCTCAATACCAGCTTTTAATAGAGATGAAGAAGCAAGGGAACTAGCTACAAAGCTCACGGAGAGTTTCA ATGCAAAACTGGCTAAAGGCTTAGATTATATGAAGAAAAGTACAAATCTTGAAATAAAAGCATTTGATCTTAACTCTAAA ATGAGAAGTATGTTTAGCGAATACAAGAGCAAAGGTTTAAATTGTCAAGATGCATGCACATCGAACATTGCAGACCAAGT TGGGAGATTTAAAGAAAATATAAAAATACTCTTAAAGTTGATATTTAAAGGGGAACTTGACGTTCACTATAACCCTGGGT GTAGCAAAGAAACACTAAAGGATTATTTCTTTTTTGATTATTTCCATCCAACTGCGGAACTTCATCATGAAGTTGGTAAT GAAGTGTATGAGTTGATTTGA
Upstream 100 bases:
>100_bases AAAAGTGGAGAGCAAGTTAGGCCAAAGTTGTATAATTTCACCGCTATTTTTCTTTTTCTATGAATCTAATGAAACAACAT GCTAATCTACAGTAAATATT
Downstream 100 bases:
>100_bases CACAGTTTTTTGAACATATCCTTTTAAATAGTAACCAGACTGCATTCTGTGATTTTTAGCAAAACACGATCTTTCATTTG AGCTTTCTTCAATTTAAAAT
Product: lipolytic enzyme, GDSL family
Products: NA
Alternate protein names: Lysophospholipase A; Lipolytic Protein; Lysophospholipase; Lipolytic G-D-S-L
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAVEYIAKYLDLDEFKPGWSYSF FGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQLDAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVL EQAVSEICNALKVLNEHGVKHVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLKDYFFFDYFHPTAELHHEVGN EVYELI
Sequences:
>Translated_326_residues MTNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAVEYIAKYLDLDEFKPGWSYSF FGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQLDAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVL EQAVSEICNALKVLNEHGVKHVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLKDYFFFDYFHPTAELHHEVGN EVYELI >Mature_325_residues TNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAVEYIAKYLDLDEFKPGWSYSFF GRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQLDAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVLE QAVSEICNALKVLNEHGVKHVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSKM RSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLKDYFFFDYFHPTAELHHEVGNE VYELI
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36931; Mature: 36800
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAV CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHCCCCCCCHHCCCCCCCCCHHH EYIAKYLDLDEFKPGWSYSFFGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQL HHHHHHHCHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH DAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVLEQAVSEICNALKVLNEHGVK HHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCE HVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLK HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH DYFFFDYFHPTAELHHEVGNEVYELI HHHHHHHCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure TNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAV CCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHCCCCCCCHHCCCCCCCCCHHH EYIAKYLDLDEFKPGWSYSFFGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQL HHHHHHHCHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH DAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVLEQAVSEICNALKVLNEHGVK HHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCE HVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLK HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH DYFFFDYFHPTAELHHEVGNEVYELI HHHHHHHCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA