Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630997

Identifier: 225630997

GI number: 225630997

Start: 1412860

End: 1413840

Strand: Reverse

Name: 225630997

Synonym: WRi_013240

Alternate gene names: NA

Gene position: 1413840-1412860 (Counterclockwise)

Preceding gene: 225630998

Following gene: 225630992

Centisome position: 97.78

GC content: 33.64

Gene sequence:

>981_bases
ATGACAAACAAAAATGACAATTCTAATTCAAAGTATAGAAATTTTTATGTTCTGGGTGATAGCTTATCCGATAATGGCGC
AATCATTGGAATTTTAAATAATTTATCCTTTGCAAAAAGCGTAAAATTTGATGATCCTTTTTATCAAGGAAGATCTTTTA
GCAATAGCCCTACTGCTGTTGAATATATAGCAAAATATTTAGATTTAGATGAATTTAAACCTGGGTGGAGTTATTCATTT
TTTGGGAGATGCCACGAACAGCAAGGTCAGAATTACGCAGTTTCATATGCAACAGCATCTGAAATTTTTGACCCTATTTT
TTCTTATTTCTTCAATAAATTTCGTTTAGCTAACCAGCTAGATGCGGTAATTAAACATCATCCAGATATAGGTAAAGAAG
ATTTATTTTGCATCATAATCGGCGGAAATGATGTTATGGTTGCCACTGCTTATGACGATACTAAAGCGGAAGAAGTGTTG
GAACAAGCAGTGAGTGAAATATGTAATGCACTTAAGGTTCTAAATGAACATGGTGTTAAGCATGTAGTTGTTGCAAATGC
ACCTGAAGTTGGCTCAATACCAGCTTTTAATAGAGATGAAGAAGCAAGGGAACTAGCTACAAAGCTCACGGAGAGTTTCA
ATGCAAAACTGGCTAAAGGCTTAGATTATATGAAGAAAAGTACAAATCTTGAAATAAAAGCATTTGATCTTAACTCTAAA
ATGAGAAGTATGTTTAGCGAATACAAGAGCAAAGGTTTAAATTGTCAAGATGCATGCACATCGAACATTGCAGACCAAGT
TGGGAGATTTAAAGAAAATATAAAAATACTCTTAAAGTTGATATTTAAAGGGGAACTTGACGTTCACTATAACCCTGGGT
GTAGCAAAGAAACACTAAAGGATTATTTCTTTTTTGATTATTTCCATCCAACTGCGGAACTTCATCATGAAGTTGGTAAT
GAAGTGTATGAGTTGATTTGA

Upstream 100 bases:

>100_bases
AAAAGTGGAGAGCAAGTTAGGCCAAAGTTGTATAATTTCACCGCTATTTTTCTTTTTCTATGAATCTAATGAAACAACAT
GCTAATCTACAGTAAATATT

Downstream 100 bases:

>100_bases
CACAGTTTTTTGAACATATCCTTTTAAATAGTAACCAGACTGCATTCTGTGATTTTTAGCAAAACACGATCTTTCATTTG
AGCTTTCTTCAATTTAAAAT

Product: lipolytic enzyme, GDSL family

Products: NA

Alternate protein names: Lysophospholipase A; Lipolytic Protein; Lysophospholipase; Lipolytic G-D-S-L

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAVEYIAKYLDLDEFKPGWSYSF
FGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQLDAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVL
EQAVSEICNALKVLNEHGVKHVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK
MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLKDYFFFDYFHPTAELHHEVGN
EVYELI

Sequences:

>Translated_326_residues
MTNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAVEYIAKYLDLDEFKPGWSYSF
FGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQLDAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVL
EQAVSEICNALKVLNEHGVKHVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK
MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLKDYFFFDYFHPTAELHHEVGN
EVYELI
>Mature_325_residues
TNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAVEYIAKYLDLDEFKPGWSYSFF
GRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQLDAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVLE
QAVSEICNALKVLNEHGVKHVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSKM
RSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLKDYFFFDYFHPTAELHHEVGNE
VYELI

Specific function: Unknown

COG id: COG3240

COG function: function code IR; Phospholipase/lecithinase/hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36931; Mature: 36800

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAV
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHCCCCCCCHHCCCCCCCCCHHH
EYIAKYLDLDEFKPGWSYSFFGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQL
HHHHHHHCHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
DAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVLEQAVSEICNALKVLNEHGVK
HHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
HVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH
MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
DYFFFDYFHPTAELHHEVGNEVYELI
HHHHHHHCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TNKNDNSNSKYRNFYVLGDSLSDNGAIIGILNNLSFAKSVKFDDPFYQGRSFSNSPTAV
CCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHCCCCCCCHHCCCCCCCCCHHH
EYIAKYLDLDEFKPGWSYSFFGRCHEQQGQNYAVSYATASEIFDPIFSYFFNKFRLANQL
HHHHHHHCHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
DAVIKHHPDIGKEDLFCIIIGGNDVMVATAYDDTKAEEVLEQAVSEICNALKVLNEHGVK
HHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
HVVVANAPEVGSIPAFNRDEEARELATKLTESFNAKLAKGLDYMKKSTNLEIKAFDLNSK
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH
MRSMFSEYKSKGLNCQDACTSNIADQVGRFKENIKILLKLIFKGELDVHYNPGCSKETLK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
DYFFFDYFHPTAELHHEVGNEVYELI
HHHHHHHCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA