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The map label for this gene is ybeB [H]

Identifier: 225630968

GI number: 225630968

Start: 1379447

End: 1379764

Strand: Reverse

Name: ybeB [H]

Synonym: WRi_012900

Alternate gene names: 225630968

Gene position: 1379764-1379447 (Counterclockwise)

Preceding gene: 225630972

Following gene: 225630967

Centisome position: 95.43

GC content: 34.28

Gene sequence:

>318_bases
ATGCTTAGCGATATGGAATCGATAAGAAGTACAATTGAAGAGATAATAGATCAAAATAAAGGTCATGATATAGTAACTTT
TGATGTGCAGAATAAAACCGTTATTGCAAAATATATGATTATTGCATCTGGTGATTCAAGCCGTCACGTTAAAGCTTTAG
CTGAGCACGTAATAAAAAGCCTCAAGCCACATGATAAAATAGATGTAGAAGGTATGGATGAAGGCAATTGGGTAGTTTTG
AATTTTCAAGGCATAATGGTTCACATATTCAGGCCGGAAGTAAGGGAGTATTATAAAATAGAAGAGTTATGGAACTGA

Upstream 100 bases:

>100_bases
AGATGCAGGTAATACCTTTAACAAGTAACTGCGTTGAAAATAGTTCATATTTAGAAATTTTGAGTATATAATTATAAATG
AATCATATAACCTGTAAACA

Downstream 100 bases:

>100_bases
TTGCCTGGATAGCTGGTGCACAACTGCACAAACGTTGTAATTTTGAAGGCAACTCCTGCACAGGTAGTGGTGTCATGAAA
GTAGCTGACACTGGAATCCA

Product: iojap-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLSDMESIRSTIEEIIDQNKGHDIVTFDVQNKTVIAKYMIIASGDSSRHVKALAEHVIKSLKPHDKIDVEGMDEGNWVVL
NFQGIMVHIFRPEVREYYKIEELWN

Sequences:

>Translated_105_residues
MLSDMESIRSTIEEIIDQNKGHDIVTFDVQNKTVIAKYMIIASGDSSRHVKALAEHVIKSLKPHDKIDVEGMDEGNWVVL
NFQGIMVHIFRPEVREYYKIEELWN
>Mature_105_residues
MLSDMESIRSTIEEIIDQNKGHDIVTFDVQNKTVIAKYMIIASGDSSRHVKALAEHVIKSLKPHDKIDVEGMDEGNWVVL
NFQGIMVHIFRPEVREYYKIEELWN

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=98, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081768, Length=92, Percent_Identity=39.1304347826087, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12185; Mature: 12185

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDMESIRSTIEEIIDQNKGHDIVTFDVQNKTVIAKYMIIASGDSSRHVKALAEHVIKS
CCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
LKPHDKIDVEGMDEGNWVVLNFQGIMVHIFRPEVREYYKIEELWN
CCCCCCCCCCCCCCCCEEEEEECCEEEEEECHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSDMESIRSTIEEIIDQNKGHDIVTFDVQNKTVIAKYMIIASGDSSRHVKALAEHVIKS
CCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
LKPHDKIDVEGMDEGNWVVLNFQGIMVHIFRPEVREYYKIEELWN
CCCCCCCCCCCCCCCCEEEEEECCEEEEEECHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]