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The map label for this gene is elbB [H]

Identifier: 225630924

GI number: 225630924

Start: 1333565

End: 1334290

Strand: Direct

Name: elbB [H]

Synonym: WRi_012410

Alternate gene names: 225630924

Gene position: 1333565-1334290 (Clockwise)

Preceding gene: 225630922

Following gene: 225630925

Centisome position: 92.23

GC content: 36.5

Gene sequence:

>726_bases
ATGAAATCAAGGTACTTTATGGGTGAAAAAAAATTAAAAGCTGCTGTGGTCTTATCAGGGTGTGGTCACCTTGACGGTGT
AGAGGTAAGAGAAGCGGTTTTAAGTTTGCTTGTGCTTGATCAGCAGGAAGTGGATGTTAAATGCTTTGCACCTGATATCA
ATATCACACAAGTTATGAATCATAGAACAAAAGAGGCAACAAAAGAAAAAAGGAATGTACTTGTGGAAGCAGCAAGAATC
GCAAGAGGCGAAATATATGACTTAAAAGAAGCCAAAGCTGAAAATTTTGACATGCTAGTTGTACCTGGTGGATACGGGGT
TGCGAAAAATTTATCTGACTTAGCTGAAAGTAAAGACATGGTGACAGTAATGCCTGAATTTGAAAGATTAGTTTCAGAAT
TTTTTGTTACAAAAAAGCCAATAGGAGCGATATGCATATCTCCAGCCATCATTGTTTCAATTTTAAGTAGCAAGATAGGT
AAAGAAGAAAGTAAGGTTAAGGTAACTATAGGAGATGACAGAGAACAGTTGATAGAAAGGCTTGGCGGCGAGCACATAAA
ATGCGATACAGAGTTATCAATAGAAGACGAAGAACATAATGTATTTTCCTGTTCTGCTTATATGCGTAGCGACGAAAGTA
CATACTCTGTATATCAAGGGATAAAGCATATGATTGACAGCATGGTAAAAAAGATTAACAAAAAAACTAAACAGCCATTC
CTATAA

Upstream 100 bases:

>100_bases
TAAATATGCCTAATTATACATACTAATCATTAATTATATTATAATTGATATAACATACCCCTTTCCAAATATAGAATTTG
TATTAAAATATCTAGATTAT

Downstream 100 bases:

>100_bases
GGTGTACTAAATAAGACTTCTCTATTAATCACACAATTAACTGTTGAATTTTACATTTCTAGCTGTATTATGGCTACGTA
GCTAAAGTAACTTAGGTTTA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKSRYFMGEKKLKAAVVLSGCGHLDGVEVREAVLSLLVLDQQEVDVKCFAPDINITQVMNHRTKEATKEKRNVLVEAARI
ARGEIYDLKEAKAENFDMLVVPGGYGVAKNLSDLAESKDMVTVMPEFERLVSEFFVTKKPIGAICISPAIIVSILSSKIG
KEESKVKVTIGDDREQLIERLGGEHIKCDTELSIEDEEHNVFSCSAYMRSDESTYSVYQGIKHMIDSMVKKINKKTKQPF
L

Sequences:

>Translated_241_residues
MKSRYFMGEKKLKAAVVLSGCGHLDGVEVREAVLSLLVLDQQEVDVKCFAPDINITQVMNHRTKEATKEKRNVLVEAARI
ARGEIYDLKEAKAENFDMLVVPGGYGVAKNLSDLAESKDMVTVMPEFERLVSEFFVTKKPIGAICISPAIIVSILSSKIG
KEESKVKVTIGDDREQLIERLGGEHIKCDTELSIEDEEHNVFSCSAYMRSDESTYSVYQGIKHMIDSMVKKINKKTKQPF
L
>Mature_241_residues
MKSRYFMGEKKLKAAVVLSGCGHLDGVEVREAVLSLLVLDQQEVDVKCFAPDINITQVMNHRTKEATKEKRNVLVEAARI
ARGEIYDLKEAKAENFDMLVVPGGYGVAKNLSDLAESKDMVTVMPEFERLVSEFFVTKKPIGAICISPAIIVSILSSKIG
KEESKVKVTIGDDREQLIERLGGEHIKCDTELSIEDEEHNVFSCSAYMRSDESTYSVYQGIKHMIDSMVKKINKKTKQPF
L

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=234, Percent_Identity=34.1880341880342, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI296531408, Length=234, Percent_Identity=29.0598290598291, Blast_Score=98, Evalue=8e-21,
Organism=Escherichia coli, GI87082228, Length=198, Percent_Identity=41.9191919191919, Blast_Score=158, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 26979; Mature: 26979

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRYFMGEKKLKAAVVLSGCGHLDGVEVREAVLSLLVLDQQEVDVKCFAPDINITQVMN
CCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
HRTKEATKEKRNVLVEAARIARGEIYDLKEAKAENFDMLVVPGGYGVAKNLSDLAESKDM
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCE
VTVMPEFERLVSEFFVTKKPIGAICISPAIIVSILSSKIGKEESKVKVTIGDDREQLIER
EEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
LGGEHIKCDTELSIEDEEHNVFSCSAYMRSDESTYSVYQGIKHMIDSMVKKINKKTKQPF
HCCCEEEECCCCCEECCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
L
C
>Mature Secondary Structure
MKSRYFMGEKKLKAAVVLSGCGHLDGVEVREAVLSLLVLDQQEVDVKCFAPDINITQVMN
CCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
HRTKEATKEKRNVLVEAARIARGEIYDLKEAKAENFDMLVVPGGYGVAKNLSDLAESKDM
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCE
VTVMPEFERLVSEFFVTKKPIGAICISPAIIVSILSSKIGKEESKVKVTIGDDREQLIER
EEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
LGGEHIKCDTELSIEDEEHNVFSCSAYMRSDESTYSVYQGIKHMIDSMVKKINKKTKQPF
HCCCEEEECCCCCEECCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]